Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00008 ATGAAAGAACGGAGTAATAGCCCTGTCAAGGAAAAAAGCCCTCTTATCGATGAACCCAGCGATCACCATTCTGCGAAGGGCTCTAAGCATGACTCTAGCAGCAATACTAGCAAGTCTGCCAACCCAACCTTATTAAAATCACCTAAATTTGAGAGCATTTTTGAAAGTTTAACCTATCAGTATTTGAGGAAAGACTCAACCCAACTAAAGCAGAGGATGGGTGAATCGAAGGGCTTGCTCACTGAAAGCCGGTCTCTTGGGGAAGAGATAGCAGACCAGAATTTGATGGCGTCGTCAAATTCAAGAAAATCGGATCTATTGCGCCGATCTTCTTCTGCTGCTGCTTCTACTTCTACCAGACCCCAATCCGTATCCGCAGTCGCTGGTGAGAATGCTAACAGAGGAAATTCGGGCTCGATGACCGTCGACAGCATTCTTCGCGATGCTTACGAGTCTGGGCCTCCCACGGAGTCTACTCTCCTAGATGCCCAAATCACTTTAATGGAGACGCCGGCCAATGCCGCCCCCGCCGCGACCTCCACCGACGGCAATGACGGCGGTGGGTCACTGAATGCTTCGAAAACCATGGATGATGTTTGGAAGGATATGATCTCTGGTGAAAGGAAGGAGTGCAAGGAGGAGGCACTGGATGAAATGATGACTCTAGAGGATTTTCTGGCCAAGGCCGGGGCTGTGGACGATGATGATGATGTGAAGATACCTGTGGCCCCCACCGAGCGGATGAGTGGGGGTGTTTTTACGTTTGATTCTATTAACGCAACCACGTTCCAGTCATTGGATAAAGTTGAAGGGTCGGTAGTCGGGTTCGGTAATGGAGTGGAGATGGATGGTGGTGGAGGAGAGAGGAATAAGAGAGCGCGTCTTGTTTTGGAGCCGTTGGATAAGGCTGCTTTGCAGAGGCAAAGGAGGATGATTAAAAACAGAGAATCCGCAGCAAGGTCTAGGGAACGAAAGCAGGCATACCAAGTTGAATTAGAGTCGATAGCGGTGAGACTAGAGGAGGAAAATGAGCGGCTGATGAGGGAAAAGGCCGAGAGGACCAAGAAAAGATACAAGCAGCTCATGGAAAGGGTTGTTCCCATTGTTGACAAGCAAAAGCAACCACGCGTACTCCGTAGGGTTCGCTCCTGGCAGTGGTAG 1161 0.4978 MKERSNSPVKEKSPLIDEPSDHHSAKGSKHDSSSNTSKSANPTLLKSPKFESIFESLTYQYLRKDSTQLKQRMGESKGLLTESRSLGEEIADQNLMASSNSRKSDLLRRSSSAAASTSTRPQSVSAVAGENANRGNSGSMTVDSILRDAYESGPPTESTLLDAQITLMETPANAAPAATSTDGNDGGGSLNASKTMDDVWKDMISGERKECKEEALDEMMTLEDFLAKAGAVDDDDDVKIPVAPTERMSGGVFTFDSINATTFQSLDKVEGSVVGFGNGVEMDGGGGERNKRARLVLEPLDKAALQRQRRMIKNRESAARSRERKQAYQVELESIAVRLEEENERLMREKAERTKKRYKQLMERVVPIVDKQKQPRVLRRVRSWQW 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00008 386 Pfam bZIP transcription factor 303 362 IPR004827 GO:0003700|GO:0006355
Pral4408g00008 386 Coils Coil 325 364 - -
Pral4408g00008 386 MobiDBLite consensus disorder prediction 1 47 - -
Pral4408g00008 386 Gene3D - 305 365 - -
Pral4408g00008 386 MobiDBLite consensus disorder prediction 173 191 - -
Pral4408g00008 386 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 304 349 IPR004827 GO:0003700|GO:0006355
Pral4408g00008 386 MobiDBLite consensus disorder prediction 1 29 - -
Pral4408g00008 386 SUPERFAMILY Leucine zipper domain 306 355 IPR046347 GO:0003700|GO:0006355
Pral4408g00008 386 MobiDBLite consensus disorder prediction 30 46 - -
Pral4408g00008 386 MobiDBLite consensus disorder prediction 173 194 - -
Pral4408g00008 386 CDD bZIP_plant_BZIP46 306 352 - -
Pral4408g00008 386 MobiDBLite consensus disorder prediction 92 140 - -
Pral4408g00008 386 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 113 382 IPR043452 GO:0003700|GO:0045893
Pral4408g00008 386 MobiDBLite consensus disorder prediction 66 140 - -
Pral4408g00008 386 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 304 362 - -
Pral4408g00008 386 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 309 324 IPR004827 GO:0003700|GO:0006355
Pral4408g00008 386 SMART brlzneu 302 364 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00008 Pral-Chr4408 126068 177107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00008 95 386 bZIP Transcription Factor Family AT5G44080 51.097 1.86e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4408g00008 bZIP_1 3.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00008 K14432 - zju:107421670 311.612