Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4407g00004 ATGATCTTCACACAGTTTGTGTATGCAGGCATGGCTTTGCTCTCTAAGGCTGCGATCTCCAAGGGAATGAACCCTTATGTGTTTGTCGTCTATAGGCAAGCCCTTGCTTCAGTTGCCTTATCACCATTTGCTTTCTTTGACAGTAAGCAGGTTACTCCCTTGTCATCCACCTTGCTCTGCAAAATCTTCATCATTTCCCTATTTGGGTTAACATTGAGTTCAAGCCTTTACTATGTTTCAATCAGCTATACTACTGCAACTTTTGCTGCAGCATCCACAAACACAATTCCTGCAATTACTTTCATCATGGCTGTTCTATTAAGAGTGGAAAGCATATCTGTAAAACACATGTATGGAGTGGCCAAGATTCTAGGTTCTGTTCTGAGCCTTTCCGGGGCAATTATATTTGCTCTAGTTAAAGGACCTCCTTTAGGATTCATGAAGTGGTATCCTCAAAATCAGGAGCATCACTCTTCTGTGTCACTAACAAAGGGTCATTCCAAACTTGATCTAATCAAAGGTCCTATCATGATGCTTTCTGCCAACACTGCATGGTCCTTGTGGCTTATATTGCAAGGTTTCATTGTAAAGCGGTACACTGCCAAGTTTCGGCTCACCACTCTGCAATGTTTCTTTAGCTGCATGCAATCAGCTGTTTTAGCTGTTGTGATTGAAAGAGATCCTTCAGCATGGAAGCTTGGATGGGACATTAATCTTCTTTCTGTGGCTTACTGTGGTGTAATTGTGACAGGGATTTGTTATTGGCTTCAAGTATGCACTATAGAGACTAAAGGACCCGTTTTTACGGCAATGTTTACCCCTCTAGCTCTTATCATCACAGCAATACTCTCAGCTCTTTTGTGGAAGGAATCACTTTATTGGGGAAGTGTTGGAGGAGCAATGTTGCTGGTGGTAGGACTGTACAGTGTATTGTGGGGAAAGAACAGAGAGTGTCCCAAACAAGAAAGCCAAGATGACAAGGAAAACACAAGTCATTCGAAATTTGACGATACCACATTGGAATGCATTATTCACCACTAA 1041 0.4198 MIFTQFVYAGMALLSKAAISKGMNPYVFVVYRQALASVALSPFAFFDSKQVTPLSSTLLCKIFIISLFGLTLSSSLYYVSISYTTATFAAASTNTIPAITFIMAVLLRVESISVKHMYGVAKILGSVLSLSGAIIFALVKGPPLGFMKWYPQNQEHHSSVSLTKGHSKLDLIKGPIMMLSANTAWSLWLILQGFIVKRYTAKFRLTTLQCFFSCMQSAVLAVVIERDPSAWKLGWDINLLSVAYCGVIVTGICYWLQVCTIETKGPVFTAMFTPLALIITAILSALLWKESLYWGSVGGAMLLVVGLYSVLWGKNRECPKQESQDDKENTSHSKFDDTTLECIIHH 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4407g00004 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 130 - -
Pral4407g00004 346 PANTHER WAT1-RELATED PROTEIN 1 323 IPR030184 GO:0016020|GO:0022857
Pral4407g00004 346 Pfam EamA-like transporter family 173 311 IPR000620 GO:0016020
Pral4407g00004 346 Pfam EamA-like transporter family 3 130 IPR000620 GO:0016020
Pral4407g00004 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4407g00004 Pral-Chr4407 39411 44183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4407g00004 1 344 Nodulin-like Gene Family AT5G07050 36.538 6.63e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4407g00004 - - pcin:129304003 580.867