Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4406g00043 ATGGAAGGAGGAGGGGGCGCTCAGCCTGGTGACACCGTCATGTCGGAGGCTACACAGCCTGATCCCCGACAACAGCAGCAGCCAACGGCTATGGGGATTGAGAATATCCCCGCTACTCTTAGCCATGGCGGCAGGTTCATCCAATACAATATCTTCGGCAATATATTCGAAGTCACAGCCAAATACAAGCCCCCCATCATGCCCATCGGTAAAGGCGCTTACGGTATCGTCTGTTCGGCTCTCAATTCCGAGACTAACGAGCACGTAGCCATCAAGAAGATTGCCAATGCATTTGACAACAAAATTGATGCCAAGAGGACCCTCCGCGAAATCAAGCTGCTCCGACACATGGATCATGAAAACGTCGTTGCAATCAGGGACATAATACCACCACCACAGAGGGAAGCATTTAATGATGTTTACATTGCGTATGAGCTAATGGACACTGACCTTCACCAAATTATTCGATCAAATCAAGCATTGTCAGAGGAGCACTGTCAGTATTTCCTGTATCAAATCCTACGTGGGCTGAAGTACATTCATTCAGCAAATGTTCTGCACAGGGACTTAAAGCCTAGCAATCTTCTCCTGAATGCCAACTGCGACTTAAAAATTTGTGATTTTGGACTGGCTCGTGTTACCTCTGAAACTGACTTTATGACTGAATATGTTGTTACAAGATGGTATCGTGCACCAGAGCTTTTGTTAAACTCTTCTGATTACACTGCAGCTATTGATGTATGGTCTGTTGGTTGTATATTTATGGAACTGATGGATCGAAAGCCATTGTTTCCTGGTCGAGATCATGTGCATCAGTTACGTCTACTTATGGAGCTGATTGGCACCCCATCGGAAGCTGACTTGGGCTTTCTGAATGAAAATGCTAAAAGATACATTAGGCAACTACCACTTTACCATCGCCAGTCTTTCCAAGAAAAGTTTCCACATGTCCATCCTGCAGCTATTGATCTTGTTGAAAAAATGTTAACTTTTGATCCCAGACAAAGGATTACTGTTGAAGATGCACTGGCACATCCCTACTTGACATCTTTGCATGACATCAGTGATGAACCTGTGTGCATGACTCCGTTTAGCTTCGACTTTGAGCAACATGCTCTGACTGAGGAACAGATGAAGGAGTTGATATATCGAGAGGCTCTTGCTTTTAACCCCGAGTATCAGCATCACTGA 1191 0.4492 MEGGGGAQPGDTVMSEATQPDPRQQQQPTAMGIENIPATLSHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYHRQSFQEKFPHVHPAAIDLVEKMLTFDPRQRITVEDALAHPYLTSLHDISDEPVCMTPFSFDFEQHALTEEQMKELIYREALAFNPEYQHH 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4406g00043 396 Gene3D Phosphorylase Kinase; domain 1 46 385 - -
Pral4406g00043 396 ProSitePatterns Protein kinases ATP-binding region signature. 69 93 IPR017441 GO:0005524
Pral4406g00043 396 Gene3D Transferase(Phosphotransferase) domain 1 147 375 - -
Pral4406g00043 396 MobiDBLite consensus disorder prediction 1 28 - -
Pral4406g00043 396 MobiDBLite consensus disorder prediction 12 28 - -
Pral4406g00043 396 SMART serkin_6 63 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4406g00043 396 ProSiteProfiles Protein kinase domain profile. 63 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4406g00043 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Pral4406g00043 396 ProSitePatterns MAP kinase signature. 98 201 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral4406g00043 396 Pfam Protein kinase domain 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4406g00043 396 FunFam Mitogen-activated protein kinase 147 375 - -
Pral4406g00043 396 SUPERFAMILY Protein kinase-like (PK-like) 68 356 IPR011009 -
Pral4406g00043 396 CDD STKc_TEY_MAPK 56 391 - -
Pral4406g00043 396 FunFam Mitogen-activated protein kinase 48 157 - -
Pral4406g00043 396 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 61 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4406g00043 Pral-Chr4406 211612 221396 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4406g00043 1 395 MAP Kinase Gene Family AT2G43790 88.101 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral4406g00043 Pkinase 8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4406g00043 K14512 - gmx:547616 756.133