Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4406g00032 ATGGGCTATGAGGATGTAGATGTTTCTGCTGTTCTTGTTGTTAGGTGCTTACCTGGCTATCCTTTCAAGTGTCCAAAGTTGCAAATTACTCCTGAGAATGGTTTATCAGAAAGTGACGCTGATAAACTTATGTCTCTCCTCCATGATCAGGCTAATTTAAATGCCAGGGAGGGAAGAGTAATGATCTTTAATTTGGTAGAGGCTGCTCAAGAGTTTATGTCCAGTATTGAGCCTGCTGGCAAATTAAATGACTCTAAGAATTTGCGCTCAACTATGGAAAGCAATGAAGAATTGTTTCTCAAGGATATAGCAACTTCAAATGGAAGTTCTTTTGTTTATGGTTTCATAGACCTCTTCAATGGCTATGGAGAATCATGGAATTGGGGTTTTGGAATGGATGAAACTTGTGGTAAAATTTCTCCAGTCCCAGCCTCAAAGTTAGATGCCCATGAGCATGTTTATGGGACTGAGGAAAATAAATCTGATATAACTTCAAAACCACCTAAAATACAAGAAACAAAGGAAGGCCTGTTAGTTTCTCCAACTGCCAAATTAGATACCTCGGGGGAAAACAGTGAAGAAAGCAACAAGAGCATGCCTTCATCTAATTCAAGTAGATGTCATGCAGTGGATCTCATAGGGAATGGCAATGAAAATGAGAAAGAGCAAGATTTTATCCTTGATGAGTATACATCAGAGGATAATGAAGAAGGTATTTATGCAACTGCGTTTTCAGAGCCTCAGTCTTCTGCATTCATGGCTCATCATCGAGAACTTCAAACAGATGAAAGGGATCTGATGATGGTCCACTTGCTTCGCCTTGTTTGTTCCTCAAAAAGTCCTTTGGCTAACTCTTTGCCGCAAATAGCTTCAGAGCTGTACAATTTAGGGATCATTTCTGATTGGGCAAAGGATATGGCATCTGAGCCACCTTCTTGTTTTAACAAAACTTTTGATCATGTTTTCCAGAAACACCTGGTATCATCTAAAATATCACAGTTTTGGAAACCTTCTGATCTTGGAGGCCCAACTACGGTTCCCATAAGTTCTCGATATTTGAATGACTTTGAGGAGCTACGGCCTCTTGGTCATGGTGGTTTTGGTCATGTTGTGTTGTGCAGAAACAAACTTGACGGAAGGCAGTATGCAGTAAAGAAAATTCGCCTTAATGACAAAAGCATGCCAGTAAATGACAGGATTTTAAGGGAAGTAGCAACTCTTTCCCGTCTGCAACATCAGCATGTTGTTCGGTATTACCAGGCATGGTTTGAAACTGGTGTTGCTGATTCTTATGCTGATGCTGGTTGGGGTTCAAGAACTCCACTGAGCTCCACCTTCAGCTTTAAAGCTACAAGGTCCCAAGAGACTCTCGGACATGAGAATCAGCTTGAATCAACTTTCCTTTACATTCAAATGGAGTACTGTCCCAGAACCCTCCGCCAGGTATTTGAGTCTTACACTCATTTTGACAAAGAACTGGCATGGCATTTGTTTCGTCAAATAGTAGAAGGCTTGGCGCACATACATGGACAGGGAATAATTCATCGGGATTTGACTCCAAGTAACATATTTTTTGATGCACGGAATGATATCAAAATTGGTGATTTTGGTCTTGCCAAGTTTTTGAAGTTGGAGCAGTTGGATCAAGATCTGGGATATCCAGGTGACACAAATGGAGTTTCCTTTGATGGCACTGGACAAATTGGGACGTATTTCTATACAGCTCCTGAAATTGAGCAAGGGTGGCCTAAGATTGATGAAAAGGCTGATATGTACAGCTTAGGGGTAGTTTTCTTTGAACTTTGGCATCCGTTTGCAACAGCAATGGAGAGACATATTGTATTATCTGATCTGAAGCAGAAAGGAGAACTACCTTCTCCATGGGTTGCTGAGTTTCCAGAACAGGAAGCCTTGCTCCGGCAGCTAATGTCTCCAAGTCCAAGAGATCGTCCTTCTGCCACAGAACTTTTACAGCATGTGTTTCCTCCACGGATGGAGTCTGAGTTATTAGATGATATCCTACAAACTATGCAGACGTCTGAGGATACAAGGATATATGATAAAATTGTAAATGCTATCTTTGATAAAGAGATGTTAAAAGCAAAAGAAAACCTCCAAGGGGCTGGTAGATTTGGGTCAGTTGGAGATAATAATTCGTCCGTTCAATACACAGATTTAGAAACTGAGGTTCGTGATTATGTTGTAGATGTCACAAGGGAAGCATTTAGGCAGCATTGTGCAAAGCGGCTGGAAATATTAACAATGCGATTATTTGATGATTTTCCAGAGTATAATAGAAATGCAGTTAAACTTTTGACCAATGGAGGAGACATGCTTGATCTTTGTTACGAGCTACGTTTGCCTTTTGTAAACTGGATTGTATCTAATCAGAAATCTTCTTTCAAACGATATGAGATAACATGTGTCTACCGACGAGCAGTTGGACGTTCATCACCAAACCGGTACCTTCAGGGTGATTTTGACATAATTGGTGGTACATCAGCATTGACAGAGGCAGAGGTCATAAAGGTGACCAGGGATATAGTCACTTGTATTTTTCCTGCAGACGCATGTGACGTTCATCTAAATCATGGTGACCTATTGGATGCAATTTGGTCATGGATCGGTGTTAAGGCTGAGCACAGACTTAAAGTGGCAGAGCTCCTTGCGATGATGGGTTCTCTGCGCCCACAATCGTCAGTAAGAAAATCAAAATGGGCTGTAATACGGAGGCAGCTTTTGCAGGAACTGAATTTAGCAGAAGCTATTGTAAATAGGTTACAAACAGTCGGTTTAAGATTCTGTGGAGCCGCTGATCAGGCCCTTCCTAGACTAAGAGGAGCCCTTCCTCCTGATAAACGCACATGCAAGGCTCTTGAAGAATTGTCTGAGCTCTGCCGTCTTTTGAGAGTTTGGAGGATTGACAGCAATGTTTTTATAGATGCTTTAATGTCCCCAACCGAAAGTTATTACAGAGATTTCTTTTTCCAGGTATACATAACAAAGGGGAATAATCCTGGATCACTCCCAGAAGGTACCTTGCTAGCTGTTGGTGGTTGCTATGACTATGTGCTTCATCAGATGTGGAGCCGTCATTATAAAGCAAATCCTCCCAGTGGCGTAGGAGCCAGCCTTGCGCTAGAGACAATAATTCAGAACTGTCCGATAGATTTTAAGCCCATTAAAAATGAAGCCAGCACCAATATTCTTGTTTGTTCAAGAGGAGGTGGTGGTCTGCTAATAGAGCGCATGGAGCTAGTGGCTGAATTATGGGAGAAAGACTTTAAGGCTGAATTTGTTCCCGTCCCTGATCCGAGTCTCACAGAGCAGTATGAGTACGCCAATGAACATGATATCAAATGTCTTGCTATCATCACTGATCAGACCGATTCTGTAAAGGTTCGCCACCTTGAACTCAAGAAGGAGAAGCAAGTTGAGAGAGAAAATCTAGTCAAGTTTCTATCAAATGCTATGACAACACAATTTCGAAACCCCTTTATTTGGAGCTGA 3510 0.416 MGYEDVDVSAVLVVRCLPGYPFKCPKLQITPENGLSESDADKLMSLLHDQANLNAREGRVMIFNLVEAAQEFMSSIEPAGKLNDSKNLRSTMESNEELFLKDIATSNGSSFVYGFIDLFNGYGESWNWGFGMDETCGKISPVPASKLDAHEHVYGTEENKSDITSKPPKIQETKEGLLVSPTAKLDTSGENSEESNKSMPSSNSSRCHAVDLIGNGNENEKEQDFILDEYTSEDNEEGIYATAFSEPQSSAFMAHHRELQTDERDLMMVHLLRLVCSSKSPLANSLPQIASELYNLGIISDWAKDMASEPPSCFNKTFDHVFQKHLVSSKISQFWKPSDLGGPTTVPISSRYLNDFEELRPLGHGGFGHVVLCRNKLDGRQYAVKKIRLNDKSMPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADSYADAGWGSRTPLSSTFSFKATRSQETLGHENQLESTFLYIQMEYCPRTLRQVFESYTHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPSNIFFDARNDIKIGDFGLAKFLKLEQLDQDLGYPGDTNGVSFDGTGQIGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELWHPFATAMERHIVLSDLKQKGELPSPWVAEFPEQEALLRQLMSPSPRDRPSATELLQHVFPPRMESELLDDILQTMQTSEDTRIYDKIVNAIFDKEMLKAKENLQGAGRFGSVGDNNSSVQYTDLETEVRDYVVDVTREAFRQHCAKRLEILTMRLFDDFPEYNRNAVKLLTNGGDMLDLCYELRLPFVNWIVSNQKSSFKRYEITCVYRRAVGRSSPNRYLQGDFDIIGGTSALTEAEVIKVTRDIVTCIFPADACDVHLNHGDLLDAIWSWIGVKAEHRLKVAELLAMMGSLRPQSSVRKSKWAVIRRQLLQELNLAEAIVNRLQTVGLRFCGAADQALPRLRGALPPDKRTCKALEELSELCRLLRVWRIDSNVFIDALMSPTESYYRDFFFQVYITKGNNPGSLPEGTLLAVGGCYDYVLHQMWSRHYKANPPSGVGASLALETIIQNCPIDFKPIKNEASTNILVCSRGGGGLLIERMELVAELWEKDFKAEFVPVPDPSLTEQYEYANEHDIKCLAIITDQTDSVKVRHLELKKEKQVERENLVKFLSNAMTTQFRNPFIWS 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4406g00032 1169 Gene3D - 1064 1160 IPR036621 -
Pral4406g00032 1169 Coils Coil 910 930 - -
Pral4406g00032 1169 Pfam Protein kinase domain 356 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4406g00032 1169 FunFam eIF-2-alpha kinase GCN2 1 82 - -
Pral4406g00032 1169 MobiDBLite consensus disorder prediction 155 169 - -
Pral4406g00032 1169 MobiDBLite consensus disorder prediction 155 174 - -
Pral4406g00032 1169 Gene3D Transferase(Phosphotransferase) domain 1 477 669 - -
Pral4406g00032 1169 SUPERFAMILY Class II aaRS ABD-related 1068 1159 - -
Pral4406g00032 1169 ProSitePatterns Protein kinases ATP-binding region signature. 362 386 IPR017441 GO:0005524
Pral4406g00032 1169 Gene3D Phosphorylase Kinase; domain 1 344 474 - -
Pral4406g00032 1169 ProSitePatterns Tyrosine protein kinases specific active-site signature. 513 525 IPR008266 GO:0004672|GO:0006468
Pral4406g00032 1169 SUPERFAMILY Protein kinase-like (PK-like) 352 670 IPR011009 -
Pral4406g00032 1169 FunFam eIF-2-alpha kinase GCN2 478 671 - -
Pral4406g00032 1169 MobiDBLite consensus disorder prediction 184 206 - -
Pral4406g00032 1169 ProSiteProfiles RWD domain profile. 1 76 IPR006575 GO:0005515
Pral4406g00032 1169 CDD STKc_EIF2AK4_GCN2_rpt2 349 659 - -
Pral4406g00032 1169 ProSiteProfiles Protein kinase domain profile. 356 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4406g00032 1169 FunFam Histidine--tRNA ligase, cytoplasmic 1064 1159 - -
Pral4406g00032 1169 Gene3D Bira Bifunctional Protein; Domain 2 721 1056 IPR045864 -
Pral4406g00032 1169 Pfam Histidyl-tRNA synthetase 807 1050 IPR041715 -
Pral4406g00032 1169 SUPERFAMILY Class II aaRS and biotin synthetases 722 1052 IPR045864 -
Pral4406g00032 1169 MobiDBLite consensus disorder prediction 180 206 - -
Pral4406g00032 1169 Pfam Anticodon binding domain of tRNAs 1068 1161 IPR024435 -
Pral4406g00032 1169 PANTHER HISTIDYL-TRNA SYNTHETASE 699 1163 - -
Pral4406g00032 1169 Gene3D Ubiquitin Conjugating Enzyme 2 83 IPR016135 -
Pral4406g00032 1169 FunFam eIF-2-alpha kinase GCN2 721 1057 - -
Pral4406g00032 1169 FunFam eIF-2-alpha kinase GCN2 344 474 - -
Pral4406g00032 1169 SUPERFAMILY UBC-like 2 73 IPR016135 -
Pral4406g00032 1169 Pfam RWD domain 7 72 IPR006575 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4406g00032 Pral-Chr4406 138235 163242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4406g00032 356 661 MAP Kinase Kinase Kinase AT1G63700 25.321 6.80e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_GCN2 Pral4406g00032 Pkinase 2.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4406g00032 K16196 - gmx:100797996 1774.21