Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4405g00006 ATGCCAAAACATCTCTGTCTCGTAACATCTTTCCTTCACCATCCGAGAGGGAGAGATATGGATTCAGCGACTCCACCGTCGCCGGAGCTCATACTCGACAGGCTAAGAACGCTCAAGGTCGTGGGTAAGGGAGCCATGGGTACCGTCTTCCTCGTCAACGACATCGTAGCCGATCCTTCTGCTCGCTGCCCCTTCGCCCTCAAGGTCGTCGAGAAGTCCTCCTTCCACAACAAGCTCGACGCGGAACGTCGTGCCCGCTGGGAAATCCATGTCCTCTCTCGCTTGACTCATCCGTTTCTTCCCTCCCTTCTAGGGACCTTTGAGGACCATCAGTTCTTGGCCTGGGCCATCCCTTACTGTCCGGGCGGCGACCTCAACGTCCTTCGTTACCGTCAATCTGATCGGGTCTTCGCCCCTGCCGTCATTCGCTTCTATTTGGCAGAGATCATCTGCGCTTTAGAGCACCTTCATGCCCTGGGCATCGCCTATCGTGATTTGAAGCCGGAGAATGTCCTTGTCCAGCAGTCCGGTCACGTGACTCTCACGGACTTCGACCTGTCTCGCCACCTCACCCCCAAAACCATCAAAACCGCCATCGCCGTCGAGCAAAATCTGTCCGATAACCGAAGCAAGCATCGCCGGAATTTCACGCGATGGATTCCAGTCCCGTCGGACATTATTCACCACAAAAGAGGATTGGTGAAGGCCAAGTCGGCCCGAGTCATCCCGGTGAGCAGAAGGAAAGCAAGTTTCTCAAATGGTGAGCGTTCTAACTCGTTCGTGGGCACAGAGGAGTACGTTTCGCCCGAGGTCGTCCGCGGCGAGGGACACGAGTTCGCCGTCGACTGGTGGGCCCTGGGCATATTGACGTACGAGATGCAGTACGGCACGACGCCGTTTAAGGGAAGGAATAGGAAAGAGACGTTTCGTAATGTTCTGATGAAAGCGCCAGAATTCGTAGGGAGGCGAACAACATTAACCGACCTGATTGAACGGCTGCTGCAGAAAGACCCCGCAAAGCGCTTGGGTTACGCGCGCGGTGCCAGCGAGATCAAGGAGCACGAGTTCTTCAGAGGGGTCCGGTGGGACCTACTAACGGAGGTCGTGCGGCCACCGTTTATTCCGTCAAGAGATGATGGGGACCGGACGGGGCGAAGAATGAGCGGCAGCGGGGCGGACATAGGCGAATACTTTGAGAGATTAAGAACGCCGGCGTCACCGGAGAAAGGACGGAACATATCCGTAACAGAATTCTAA 1257 0.5593 MPKHLCLVTSFLHHPRGRDMDSATPPSPELILDRLRTLKVVGKGAMGTVFLVNDIVADPSARCPFALKVVEKSSFHNKLDAERRARWEIHVLSRLTHPFLPSLLGTFEDHQFLAWAIPYCPGGDLNVLRYRQSDRVFAPAVIRFYLAEIICALEHLHALGIAYRDLKPENVLVQQSGHVTLTDFDLSRHLTPKTIKTAIAVEQNLSDNRSKHRRNFTRWIPVPSDIIHHKRGLVKAKSARVIPVSRRKASFSNGERSNSFVGTEEYVSPEVVRGEGHEFAVDWWALGILTYEMQYGTTPFKGRNRKETFRNVLMKAPEFVGRRTTLTDLIERLLQKDPAKRLGYARGASEIKEHEFFRGVRWDLLTEVVRPPFIPSRDDGDRTGRRMSGSGADIGEYFERLRTPASPEKGRNISVTEF 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4405g00006 418 FunFam Serine/threonine-protein kinase OXI1 255 376 - -
Pral4405g00006 418 FunFam Serine/threonine-protein kinase UCNL 35 123 - -
Pral4405g00006 418 Gene3D Transferase(Phosphotransferase) domain 1 124 194 - -
Pral4405g00006 418 Gene3D Transferase(Phosphotransferase) domain 1 252 376 - -
Pral4405g00006 418 Gene3D Phosphorylase Kinase; domain 1 36 123 - -
Pral4405g00006 418 FunFam Serine/threonine-protein kinase OXI1 124 192 - -
Pral4405g00006 418 ProSiteProfiles Protein kinase domain profile. 35 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4405g00006 418 ProSitePatterns Protein kinases ATP-binding region signature. 41 68 IPR017441 GO:0005524
Pral4405g00006 418 Pfam Protein kinase domain 251 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4405g00006 418 Pfam Protein kinase domain 37 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4405g00006 418 SUPERFAMILY Protein kinase-like (PK-like) 20 375 IPR011009 -
Pral4405g00006 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Pral4405g00006 418 PANTHER FLIPPASE KINASE 1-RELATED 29 377 - -
Pral4405g00006 418 SMART serkin_6 35 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4405g00006 Pral-Chr4405 31108 32667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4405g00006 26 407 AGC Kinase Gene Family AT1G51170 61.111 5.17e-164 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4405g00006 Pkinase 1.1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4405g00006 - K08286 qsa:O6P43_000123 590.882