Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4404g00033 ATGAGGAAGTCCGAGCCATCTGGAAAAAACAAGCAGCTTAGAAAGGGTTTGTGGTCACCGGAAGAAGATGACAAGCTCATGAGGTACATGCGCAACAATGGACGAGGTTGTTGGAGTGATGTGGCCAGGAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGCCTTCGATGGATCAATTATTTGAGGCCTGACCTTAAACGAGGCGCTTTCTCACCCCAAGAGCAACAACTCATCATCCATTTGCACTCCCTTCTTGGCAACAGATGGTCCCAAATAGCGGCACGCTTACCAGGACGAACAGACAATGAAATCAAGAACTTTTGGAACTCCGCAATGAAAAAAAGACTCAAGAATTCTTTGGGCGCGAAAGACTTCAACATGGGAGGGCTTGTTTCTGCTCAATATCAACATAGCTTTAATGTGCCTATGTTCAACTCGTCTCCATCTTCATCAACAGTTGACAGGATTCCTGAGCGAAGATTGCAGTGTGCATCAGGTGGATTACTCTCAGGAAGTCAGGTGGTTGAGGGGGTAGACATTGGAATATCAGAAGGGGATCAGTTGTTTGGTACTCTAGAGGCCACTGCCAACCTCAAAGGGGAGAGCACGTGCCACGCACACACCACCAATGCTTACTTTGAAGACGTAAACGGTAGTATGGCTGATCACTGTGACAGAGCTGAGGCGGAGAATTCATTTGAACTAGAGTTAATCACGGGCATGGAAGAGTGGAATCTTGAGGATATCATGAAGGATATTCCATCTTCTTCCTTCCTTGATTTTTACCCCGGCTTTTTTTAA 804 0.4639 MRKSEPSGKNKQLRKGLWSPEEDDKLMRYMRNNGRGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEQQLIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSAMKKRLKNSLGAKDFNMGGLVSAQYQHSFNVPMFNSSPSSSTVDRIPERRLQCASGGLLSGSQVVEGVDIGISEGDQLFGTLEATANLKGESTCHAHTTNAYFEDVNGSMADHCDRAEAENSFELELITGMEEWNLEDIMKDIPSSSFLDFYPGFF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4404g00033 267 Gene3D - 12 68 - -
Pral4404g00033 267 CDD SANT 18 62 IPR001005 -
Pral4404g00033 267 SUPERFAMILY Homeodomain-like 13 109 IPR009057 -
Pral4404g00033 267 SMART sant 14 64 IPR001005 -
Pral4404g00033 267 SMART sant 67 115 IPR001005 -
Pral4404g00033 267 FunFam MYB transcription factor 12 68 - -
Pral4404g00033 267 FunFam Myb transcription factor 70 117 - -
Pral4404g00033 267 PANTHER MYB DOMAIN PROTEIN 55 8 146 - -
Pral4404g00033 267 Pfam Myb-like DNA-binding domain 68 111 IPR001005 -
Pral4404g00033 267 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Pral4404g00033 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Pral4404g00033 267 CDD SANT 70 110 IPR001005 -
Pral4404g00033 267 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Pral4404g00033 267 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral4404g00033 267 Gene3D - 69 128 - -
Pral4404g00033 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4404g00033 Pral-Chr4404 174019 175663 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4404g00033 1 118 MYB Transcription Factor Family AT5G12870 78.049 4.45e-66 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral4404g00033 Myb_DNA-binding 3.1e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4404g00033 K09422 - gmx:100785810 284.263