Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4404g00019 ATGTATGGATTTGCTCTGCCTCTAACTGGAAACAATTTCCTTTACCGGGCTAAACTGTGTTTTAGATCCATCGGACCTTCCTTGCTCCTGCAAAACCTAGCTAATTCTTCCTTACCCAATAGTGCATTCGGTCGTCGACGTGATTTTAATCCCGTCCTATTCCAGTCGGAATCCGTTTTTCCTTCCTGCTGGAACTATAAGCATACAAGAGGTAGCATCATTCTTCTGAAAGCCAGCCGTCGGGAGTCTCCTTACGAAGTTTTGGGCGTATCTCCATCAGCTACAGCAGATGAGATCAAAAGGGCATACAGAAAGCTTGCTCTTAAGTATCATCCTGATGTCAATAAAGAGGACAAGGCGCAGGAGAAGTTTATGAGGATAAAACACGCATACAATACATTGATAAATTCTACTTCGCGTAGAAAATTTGATTCTGGAAATGGTGGTTCCGATTCTTATTATTCCTCTCAGAGAAGCCAAAGTGGTGATGCAAAAGTAGAAGAAGAATTTTATGGATTAGGTAATTTTTTGAGGGATGTTCAAATAACAATAGGGGAGTTTTTCAAAGATGTTCAAGAAGAATTCAGGAACTGGGAAGCAAACTCTACTTCACAAGGAAAGCCGAAAAGCCTATGGGAGGAATTGGCGGAAATAGGAGAAGAATTTGTGGAGTTTCTGGAGAAAGAACTTGATATAGTTGATTCGGGTGATAATTATCAAAAGCCTCGGGGAGGAAATCCTTCTCGTACTTCTGCTGGCAGTGGCCCTCAAGATGAAAGTGGCAAGGGGAACAGCAGCATCAAGGATAACCTTGATGAAATAGAAGCTACTCTTGCTCAGTTAAAAAAGGAATTAGGTTTGTAG 864 0.4155 MYGFALPLTGNNFLYRAKLCFRSIGPSLLLQNLANSSLPNSAFGRRRDFNPVLFQSESVFPSCWNYKHTRGSIILLKASRRESPYEVLGVSPSATADEIKRAYRKLALKYHPDVNKEDKAQEKFMRIKHAYNTLINSTSRRKFDSGNGGSDSYYSSQRSQSGDAKVEEEFYGLGNFLRDVQITIGEFFKDVQEEFRNWEANSTSQGKPKSLWEELAEIGEEFVEFLEKELDIVDSGDNYQKPRGGNPSRTSAGSGPQDESGKGNSSIKDNLDEIEATLAQLKKELGL 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4404g00019 287 MobiDBLite consensus disorder prediction 241 264 - -
Pral4404g00019 287 Gene3D DnaJ domain 80 206 IPR036869 -
Pral4404g00019 287 Pfam DnaJ domain 84 144 IPR001623 -
Pral4404g00019 287 MobiDBLite consensus disorder prediction 234 270 - -
Pral4404g00019 287 SUPERFAMILY Chaperone J-domain 79 150 IPR036869 -
Pral4404g00019 287 MobiDBLite consensus disorder prediction 141 160 - -
Pral4404g00019 287 SMART dnaj_3 82 139 IPR001623 -
Pral4404g00019 287 Coils Coil 264 284 - -
Pral4404g00019 287 ProSiteProfiles dnaJ domain profile. 83 147 IPR001623 -
Pral4404g00019 287 ProSitePatterns Nt-dnaJ domain signature. 124 143 IPR018253 -
Pral4404g00019 287 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 49 230 - -
Pral4404g00019 287 PRINTS DnaJ domain signature 103 118 IPR001623 -
Pral4404g00019 287 PRINTS DnaJ domain signature 119 139 IPR001623 -
Pral4404g00019 287 PRINTS DnaJ domain signature 85 103 IPR001623 -
Pral4404g00019 287 CDD DnaJ 84 136 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4404g00019 Pral-Chr4404 99754 102345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4404g00019 79 145 C2H2 Transcription Factor Family AT1G74250 38.356 1.18e-07 50.8