LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4404g00015	ATGGCGGAGATATGCTGCGGGGTGGTGAGCGAGAGCGATGCCTCGGGTGCGTGTCAGCCGAGCTCGCGTGAAGCCAGAAGGAGGAGAATGGAGATCAGGCGATTTAAGGTGGTGGAAGGCGAGGAGAAACGCCCCAAACTCCGCCTTGCTCCCCACTCCTTGTCTCGGGACTGTGAGAATGCCGTGGAGAACTGCGCTACTGATATAGAGAAAGCCCTCGCGTTTCTATCCCCCAACCCAGGAAAATCAGAGACCCGTGACAAACAAACTTCGGGTGACTCCTTCGACCCAACGTACTCACCAGTTCCTGCGAGTCCGTATCCTAAATTCGGGGTTGCATCGGTGTGTGGAAGGCGAAGAGATATGGAGGATGCTGTGGCTGTCCATCCCTGGTTTTGCGGGGACCATCAAGCCTCTGGTGAATTTCACTACTTTGGAGTCTACGATGGCCACGGCTGCTCTCATGTAGCGGCTAAATGTAAGGACCGATTGCATGAGTTGGTGAAAGAAGAGCTAGAGAAACAGGAGTGGTCGATGTGTTGGGAGGGTGCGATGGAGCGAAGCTTCTCGCGAATGGACCAGGAGGTCATTGCTTGGAATGCTAATGCCTTGGAAGCCGATTGTAGGTGTGAGCTTCAGTCGCCCGAGTGCGACGCCGTTGGATCTACGGCCGTCATTGCTATCTTGACCGCCGACGAGGTTATCGTTGCCAACTGTGGTGATTCAAGGGCCGTGCTCTGCCGCAACGGCAAACCCATCCCTCTCTCCTCCGATCACAAGCCGGATCGTCCGGACGAGCTGAACCGGATCCATGAAGCTGGAGGACGGGTTATATTCTGGGATGGACCACGCGTTCTGGGAATGCTTGCGATGTCAAGAGCCATAGGTGACAATTACTTGAAGCCTTACGTGAGCTGCGTGCCGGAGGTGACGATAACGGATCGGACGGCGGAGGACGACTGTTTGATACTGGCAAGTGACGGGTTATGGGACGTGGTGTCGAATGAGACAGCGTGTGGGGTGGCACGTATGTGTCTGCGCGGAAGGAACCACGCGCCACCGAGCCAAGAGGTGGCGTTGGAATGCGAAATGGAAGGGGCTGCGACGGAGACGTCAGACAAAGCGTGCTCTGAGGCGTCAACGTTGCTGACGAAGCTTGCTTTGGCCAGGCACTCCACTGACAACGTCAGCGTAGTGGTGGTGGATCTCAGGACGAGGGCCTGA	1224	0.5645	MAEICCGVVSESDASGACQPSSREARRRRMEIRRFKVVEGEEKRPKLRLAPHSLSRDCENAVENCATDIEKALAFLSPNPGKSETRDKQTSGDSFDPTYSPVPASPYPKFGVASVCGRRRDMEDAVAVHPWFCGDHQASGEFHYFGVYDGHGCSHVAAKCKDRLHELVKEELEKQEWSMCWEGAMERSFSRMDQEVIAWNANALEADCRCELQSPECDAVGSTAVIAILTADEVIVANCGDSRAVLCRNGKPIPLSSDHKPDRPDELNRIHEAGGRVIFWDGPRVLGMLAMSRAIGDNYLKPYVSCVPEVTITDRTAEDDCLILASDGLWDVVSNETACGVARMCLRGRNHAPPSQEVALECEMEGAATETSDKACSEASTLLTKLALARHSTDNVSVVVVDLRTRA	407

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4404g00015	407	MobiDBLite	consensus disorder prediction	76	100	-	-
	Pral4404g00015	407	ProSiteProfiles	PPM-type phosphatase domain profile.	109	403	IPR001932	-
	Pral4404g00015	407	FunFam	Protein phosphatase 2C 37	104	407	-	-
	Pral4404g00015	407	ProSitePatterns	PPM-type phosphatase domain signature.	144	152	IPR000222	GO:0043169
	Pral4404g00015	407	SMART	PP2C_4	97	401	IPR001932	-
	Pral4404g00015	407	CDD	PP2Cc	109	403	IPR001932	-
	Pral4404g00015	407	Gene3D	-	102	407	IPR036457	-
	Pral4404g00015	407	PANTHER	PROTEIN PHOSPHATASE	74	403	IPR015655	GO:0004722\|GO:0006470
	Pral4404g00015	407	Pfam	Protein phosphatase 2C	110	394	IPR001932	-
	Pral4404g00015	407	SUPERFAMILY	PP2C-like	104	404	IPR036457	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4404g00015	Pral-Chr4404	76345	78294	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4404g00015	1	404	PP2C-type Phosphatase Gene Family	AT2G29380	55.556	1.48e-148	424

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4404g00015	K14497		-	cave:132163544	550.436

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