Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4404g00013 ATGGCACAACAAGGGCAGGGCACCAGGGACCCTGCCATTTTGGATGACATTATCAATCGACTATTGGAGTTACGACACGCCAAGCCTGGCAAACCAGTCCAGCTAGCGGAGGCTGAGATTCGCCAGCTTTGCAATGTTTCCAGAGACGTCCTCCTTCGACAGCCCATTCTTCTTCAGCTCCAGGCACCTATCAAAATATGTGGTGACATCCAGGGACAATATTCTGACCTATTGAGGATATTTGAGCATGGGGGCTTTCCTCCGGATTCTAATTATTTATTCCTAGGAGATTATGTGGATCGTGGGAAGCAGAGTTTGGAAACAATTTGTCTATTGTCTGCCTACAAGATTAAATTCCCAGATAACTTTTTTATTCTAAGAGGCAATCATGAGTGTGCTACAATCAGTCGTATATACGGATTCTATGATGAATGTAAGCGCCGTTTTAATGTGAAACTATGGAAAACTTTCATTGATTGCTTTAACTGTCTTCCTGTTGCTGCGGTCATAGATGAGAAAATTTTCTGCATGCATGGGGGTATATCTCCTGAGCTGGCAAGTTTAGATCAAAGTCAAAGCCTACCTCGGCCTACTGAGATTCCAGAATCTGGATTGCTCTGTGATTTGCTTTGGGCGGACCCTGGAAAAACTATAAAAGGCTGGGCAATGAATGAACGCGGAGTCTCCCACACCTTTGGTGCAGACAAGGTGTCTGAATTCTTAATGAAGAATGACATGGATCTCATCTGCCGTGCTCATCAGGTTGTTGAGGATGGATATGAATTTTTTGCTGACAGACAGCTTGTCACCATATTCTCTGCACCCAATTATTGTGGCGAATTTGATAATGCCGGTGCTATGATGATTGTTGATGAAAACTTAATATGCTCTTTCCAAATCTTTAAACCCGCAGATAAAATATTTGGATTCTTTTGA 936 0.4295 MAQQGQGTRDPAILDDIINRLLELRHAKPGKPVQLAEAEIRQLCNVSRDVLLRQPILLQLQAPIKICGDIQGQYSDLLRIFEHGGFPPDSNYLFLGDYVDRGKQSLETICLLSAYKIKFPDNFFILRGNHECATISRIYGFYDECKRRFNVKLWKTFIDCFNCLPVAAVIDEKIFCMHGGISPELASLDQSQSLPRPTEIPESGLLCDLLWADPGKTIKGWAMNERGVSHTFGADKVSEFLMKNDMDLICRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMIVDENLICSFQIFKPADKIFGFF 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4404g00013 311 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 304 - -
Pral4404g00013 311 Pfam Calcineurin-like phosphoesterase 63 255 IPR004843 GO:0016787
Pral4404g00013 311 FunFam Serine/threonine-protein phosphatase 6 309 - -
Pral4404g00013 311 CDD MPP_PP1_PPKL 14 303 - -
Pral4404g00013 311 Gene3D - 7 309 IPR029052 -
Pral4404g00013 311 SMART pp2a_7 35 305 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 63 90 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 245 265 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 159 185 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 267 283 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 92 119 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 125 149 IPR006186 GO:0016787
Pral4404g00013 311 PRINTS Serine/threonine phosphatase family signature 188 215 IPR006186 GO:0016787
Pral4404g00013 311 Pfam Serine-threonine protein phosphatase N-terminal domain 14 61 IPR031675 -
Pral4404g00013 311 SUPERFAMILY Metallo-dependent phosphatases 28 306 IPR029052 -
Pral4404g00013 311 ProSitePatterns Serine/threonine specific protein phosphatases signature. 126 131 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4404g00013 Pral-Chr4404 65856 67719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4404g00013 64 248 Calmodulin-binding Proteins AT5G63870 32.127 2.11e-27 107