Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4404g00010 ATGGATCCAAATTTGCCTGCGATTCGTAATTCCCTGAACGGACATCAACTGGCTGATGGCACCGTCTTCTCTGATACAAATCAACACAGAAATCTGGAAGATGAATGGAATCCTGACGAAGACCACCAGACCGTTCTTAATTTCTACCGTGATATTTTTCATCAACCTCATGTGGACCCACTTAGTTATGCTCCGCACACAAGCTTGATTTCTGAAGGAGCACCGCCGAATCAATCCTGGAGTGCGAGTCCCGTGGAAGGTGTGCCAGATGTCCCGTATTCAGCCGCGACTTCGGCTCCGGATCCTTCTCTAGAAGATTACGATTTTTCAGAAACCATCAAGTACATGAGCCAAGTTCTTATGGAGGAGAACTTGGAACAGAAGCCGTGCATGTTTTATGATCCACTCAGTCTAAAACTCACTGAGAAATCATTTTATGATGCCCTTCGATACAACCAACCTCTCTCTCCTAATGAGCACCCTCTCCTTGACATTGTTGAGAGCCCAGATGCTCATTCCTCTGGAACTGGTACTGATTCTAGCGCCGGCGGTGGCGGCACCAGCACCAGCACAAGCACCAACGACTTAGAATTAAGGCCCTCTTCGCCAGAGAACGCTGTTTTGGGGGATTATGCTTTCCAGTTCAAATCGCAATCCATATCTCAGCGGCCCTCACAACCTCCAAATACTTCACTTAATATCAGTGACGGACTCCTGAATTTGGATTCTTCTATTACTCAGCTTTTGGCTCAAAATATCTTTAGTGATGCAGAATCTGTCTCGCAATTCAATAGAGGTTTAGAGGAAGCTAGCAAATTTCTTCCCAGAGGAGCTCAACTCGTCACTGGTCTGGAGAGCACCACAGTGTCTGTACAGTCAAAGGGGCTGGGAGAAAAGGCGGCGCTGAAAATAGAGAAAGATGCTAGGGAGAATTCGCATGGGTTAAAGGGTAGAAAGAATCATGACCGTGACGGTAGTGTTGATGAAGAAGAAGGGAGAAGCAACAAGCAATCAGCAGTGTATGTCGATGAGAGTGAATTATCGGAGATGTTCGACAAAGTGTTGCTGAGTGTTGAGAATGTTCCATTCTGTGCTGAGTACGAAAGCTCGCACGGTGGATCAGCGAAAGACATGCCGCCAAGTGAGCAGGCTGTGGAATCATCTGATGGAGGGAAGACACGCTCTAAGAAACAAGGCAGTAAGAAGGAAACGGTGGATTTGAGGACACTTTTGGTGTTATGTGCACAAGCCGTGTCTTCCAACGATAGAAGGACTGCTCATGAATTGCTAAAACAGATCAGGCAACATTCTTCACACTTGGGGGATGCATCTCAGAGGGTGGCTCATTATTTTGCCAATGGCCTTGAGGCACGTTTGGTAGGTGATGGTGCTGGAACCCAGCTATTTTATACTTCTCTGAGCTCCAAGAGAATCTCTGCTGCTGAGATCTTGAAAGCTTATCAAGTTTCAATATCTGCCGCACCTTTTAAGAAGTTCGCACATTTCTTTGCAATAAAGATGATTTTAAAAGCAGTCGAAAAGGCAGAAACCCTCCATATTGTTGATTTTGGTATCCTATATGGTTTCCAGTGGCCGATGCTTATCAAATTTCTTTCAAATAGAGCTGGTGGACCTCCCAAGCTACGCATCACAGGAATAGAATTTCCCCAACCTGGCTTTCGTCCAGCAGAGAGAATTGAGGAAACCGGTCGTCGTCTTGCTAACTATTGCAGTCGTTTTAATGTTCCCTTTGAGTACAAAGCTATGGCATCACAAAACTGGGAAACCATCCAAATTGAAGACCTTAAGATTGAAAGGAATGAGGTACTTGCTGTGAACTGTTTGGTGAGGTTTAAGAATTTACTGGATGAGACCATTGAAGTGAACAGTCCTAGGAATGCAACTCTAAATCTAATAAGGAAAATGAAACCGGATCTCTTTGTTCAAACCATTCTTAATGGATCCTACAATGCCCCTTTCTTCGTTACACGGTTCAGGGAGGCACTGTTCCATTTCTCTGCGTTATATGATATGTTTGATACTTTGATACCCCGTGAAAACCCATGGAGGTTGATGCTTGAGAAAGAAATTTATGGTCGGGAGGCTATGAACGTGGTGGCATGTGAAGGACTAGAAAGGGTTGAGAGGCCTGAGACATACAAACAATGGCAGGCAAGAGTTGTAAGGGCAGGTTTCAAGCAGCTCCCACTGAATAAGGAGCTCATGGCCAAGTTCAGGGAAAAGATGGCGGCATGGTACCACAAAGATTTTGTGTTCGATGAAGACAACAACTGGATGCTTCAGGGCTGGAAGGGACGCATTTTGTACGCTTCCACTTGTTGGGTCCCAGCATAA 2355 0.4539 MDPNLPAIRNSLNGHQLADGTVFSDTNQHRNLEDEWNPDEDHQTVLNFYRDIFHQPHVDPLSYAPHTSLISEGAPPNQSWSASPVEGVPDVPYSAATSAPDPSLEDYDFSETIKYMSQVLMEENLEQKPCMFYDPLSLKLTEKSFYDALRYNQPLSPNEHPLLDIVESPDAHSSGTGTDSSAGGGGTSTSTSTNDLELRPSSPENAVLGDYAFQFKSQSISQRPSQPPNTSLNISDGLLNLDSSITQLLAQNIFSDAESVSQFNRGLEEASKFLPRGAQLVTGLESTTVSVQSKGLGEKAALKIEKDARENSHGLKGRKNHDRDGSVDEEEGRSNKQSAVYVDESELSEMFDKVLLSVENVPFCAEYESSHGGSAKDMPPSEQAVESSDGGKTRSKKQGSKKETVDLRTLLVLCAQAVSSNDRRTAHELLKQIRQHSSHLGDASQRVAHYFANGLEARLVGDGAGTQLFYTSLSSKRISAAEILKAYQVSISAAPFKKFAHFFAIKMILKAVEKAETLHIVDFGILYGFQWPMLIKFLSNRAGGPPKLRITGIEFPQPGFRPAERIEETGRRLANYCSRFNVPFEYKAMASQNWETIQIEDLKIERNEVLAVNCLVRFKNLLDETIEVNSPRNATLNLIRKMKPDLFVQTILNGSYNAPFFVTRFREALFHFSALYDMFDTLIPRENPWRLMLEKEIYGREAMNVVACEGLERVERPETYKQWQARVVRAGFKQLPLNKELMAKFREKMAAWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4404g00010 784 MobiDBLite consensus disorder prediction 304 337 - -
Pral4404g00010 784 MobiDBLite consensus disorder prediction 171 200 - -
Pral4404g00010 784 MobiDBLite consensus disorder prediction 368 402 - -
Pral4404g00010 784 MobiDBLite consensus disorder prediction 160 203 - -
Pral4404g00010 784 ProSiteProfiles GRAS family profile. 398 782 IPR005202 -
Pral4404g00010 784 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 345 777 IPR005202 -
Pral4404g00010 784 MobiDBLite consensus disorder prediction 304 341 - -
Pral4404g00010 784 Pfam GRAS domain family 407 781 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4404g00010 Pral-Chr4404 50775 54306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4404g00010 112 784 GRAS Transcription Factor Family AT1G07530 53.076 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4404g00010 GRAS 3.1e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4404g00010 - - pcin:129314564 1007.67