Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4404g00003 ATGAAGTGCTTCCATTTCTCAAACGCGGGAGGAGAACCCCGTGAAGACGATGACTCGGTTACCTCTAAGGTTTCCAAGCTCTCCTGGGCTCGCTCGCTCAGCGTTGCTTCTTCTACCTTGGGCTCGAGGAGGTCTGAATTTGATTCTGAATTAAAGGACTTCTCCGATGCAGTTGAGTTCCATAAATTCTTGTCTCAGAGGCGTGCTAATGATCTGCGCGTGTTTTCCTTCTCTGAGCTCAAATTGGCAACTCGTGGGTTCAGCAGAGCCCTCTTGATTGGAGAGGGGGGGTTTGGTTGTGTCTACAAAGGAGTTGTCAAGGTACCCAACGAGCATGCAAATGACGGTTGTCTTTCCAATATGGATGTTGCGATCAAGCAATTGAACCGTAATGGACCCCAGGGGCACAGGGAATGGATCAATGAAGTAAACTTGTTGGGTGTAATTAAGCATCCAAATCTTGTGAAGTTAGTGGGATATTGCGCTGAAGATGATGAAAGGGGAATTCAGCGGCTTCTGGTCTATGAGCTCATGCGGAATAAGAGCTTGGAAGATCATCTTTTGGGTAGAGTTCCATCAGCACTTACATGGATAGCTAGATTAAAAATCGCTCAAGATGCCGCCCGTGGATTGGCATATCTGCATGAAGAAATGGATTTTCAGCTTATTTTTCGGGATTTTAAGACATCCAATGTCCTGCTGGATGAGGACCTAAGTGCAAAGCTTTCTGATTTCGGACTTGCTAGGCAAGGACCCTCAGAAGGATTTGGCCATGTTTCAACATCTGTTGTGGGGACTATCGGTTATGCTGCACCGGAGTATGTTCATACTGGTAAGTTAACTGCCAAGAGTGATGTTTGGAGCTTTGGTGTGGTTCTTTTTGAACTCATCACTGGGAGGCGAGCTGTTGAGAGAAACCTACCGAGAAATGAACAGAAGCTTTTGGAATGGGTGAGACATTTTGTCTCTGACCCTAGAAAGTTCCATCTTCTGGTAGACCCACGACTTGAGGGACAATATTGCATTAAATCAGTTCAAAAACTTGCAGCCCTGGCAAACAGGTGTCTTGTGAAGCACCCGAAGTACCGCCCTAAAATGAGTGAAGTGGTCGAAATACTTGGAGGCATAATTAACGACGCAGTTTCTCAATTTGAATGCCCTCTTCAAGCTGTTGTAAGTGAAGAAGAAAAAGAAGAGAAGTTGTCTGAAGAGGACACTGAATCTGGGGCGGCTAAACAAGGGAATAATTATCTGAAGAAGGTCGTGGACTTCAGAGAAATGATGAGTTTAAGAAACAAGTCCATTAGAAGGTTGGATTGGAAAAATTGGGCGCCTGGTCTGGTACGAACTTGA 1353 0.4538 MKCFHFSNAGGEPREDDDSVTSKVSKLSWARSLSVASSTLGSRRSEFDSELKDFSDAVEFHKFLSQRRANDLRVFSFSELKLATRGFSRALLIGEGGFGCVYKGVVKVPNEHANDGCLSNMDVAIKQLNRNGPQGHREWINEVNLLGVIKHPNLVKLVGYCAEDDERGIQRLLVYELMRNKSLEDHLLGRVPSALTWIARLKIAQDAARGLAYLHEEMDFQLIFRDFKTSNVLLDEDLSAKLSDFGLARQGPSEGFGHVSTSVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLFELITGRRAVERNLPRNEQKLLEWVRHFVSDPRKFHLLVDPRLEGQYCIKSVQKLAALANRCLVKHPKYRPKMSEVVEILGGIINDAVSQFECPLQAVVSEEEKEEKLSEEDTESGAAKQGNNYLKKVVDFREMMSLRNKSIRRLDWKNWAPGLVRT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4404g00003 450 ProSitePatterns Protein kinases ATP-binding region signature. 93 126 IPR017441 GO:0005524
Pral4404g00003 450 PANTHER OS01G0588500 PROTEIN-RELATED 47 375 - -
Pral4404g00003 450 Gene3D Transferase(Phosphotransferase) domain 1 178 395 - -
Pral4404g00003 450 SUPERFAMILY Protein kinase-like (PK-like) 69 373 IPR011009 -
Pral4404g00003 450 Gene3D Phosphorylase Kinase; domain 1 67 177 - -
Pral4404g00003 450 ProSiteProfiles Protein kinase domain profile. 87 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4404g00003 450 CDD STKc_IRAK 93 376 - -
Pral4404g00003 450 FunFam Serine/threonine-protein kinase BIK1 56 177 - -
Pral4404g00003 450 Pfam Protein tyrosine and serine/threonine kinase 93 373 IPR001245 GO:0004672|GO:0006468
Pral4404g00003 450 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4404g00003 Pral-Chr4404 13232 16122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4404g00003 3 412 Glycoside Hydrolase AT3G07070 41.487 1.02e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral4404g00003 PK_Tyr_Ser-Thr 4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4404g00003 - - qsa:O6P43_000204 699.123