Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4403g00001 ATGGTTTTCTCTTCTATTCCAGTCTATTTAGATCCTCCCAACTGGCAGCAGCAACAAAGTTATCATCAAACAAATGAGATCAGTGAGCCTCCGCTCCTGCCTCCACAAGCGCCTCATATGGTCTCAATCAGGCCTGGATCGATGGCGGATCGAGCCCGGCTTGCAAAGATACCACCGCCGGAGGCAGCTCTAAAGTGTCCTCGCTGTGAATCTACCAACACGAAATTCTGCTACTTCAACAACTACAGCCTGTCTCAACCCAGGCACTTCTGCAAGACCTGTAGGCGTTACTGGACAAGAGGAGGCGCTCTCAGGAACGTTCCGGTTGGCGGAGGATGCCGCAGAAACAAGAAGACCAAGAGAAGCCGCTCCAAGTCTCCGGCAGCCTCCGACAAACAGCCACCGTCTAACCCCTCATCAGGCGGGGCCGCCATAGCCACCGAGCTGATTGGTCATATGCCGCCCCAAGCATCTAATTTACAATTCATGGCGTCCTTACAGAATCTGAGTCGCTATGGCGTGGGAAGCATGGGCCTCAACTTGCAAGGACAGAGTGATCACATGTTTCCCATTGGACTTAATGGAAGTGATATTTCGAGCGGAGGACTGGATCAGTGGCGGTTAAAGCAGTTTACTTTCTTGAATGGTTTTGATCAGTCAAGTTCAGCTGCTTCTGCTTCAAACCCATTTCAAAGCGAACTTGGGAATTCTAGGGTTACGCAGCTGCCGCCAGTTAAGTTGGAAGACAATGGAGCGCTAAATTTGTCCAGGTCGCAAGCTCGGAGTATATCAGAAAATAACAACCAATACTACTCATGGACTCCAACCACAGATATTATATCAGGCCTTGCCTCTTCTTCCACGACCCATGTGTTGTAA 879 0.5006 MVFSSIPVYLDPPNWQQQQSYHQTNEISEPPLLPPQAPHMVSIRPGSMADRARLAKIPPPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKTKRSRSKSPAASDKQPPSNPSSGGAAIATELIGHMPPQASNLQFMASLQNLSRYGVGSMGLNLQGQSDHMFPIGLNGSDISSGGLDQWRLKQFTFLNGFDQSSSAASASNPFQSELGNSRVTQLPPVKLEDNGALNLSRSQARSISENNNQYYSWTPTTDIISGLASSSTTHVL 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4403g00001 292 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Pral4403g00001 292 MobiDBLite consensus disorder prediction 128 143 - -
Pral4403g00001 292 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 218 IPR045174 GO:0003700|GO:0006355
Pral4403g00001 292 MobiDBLite consensus disorder prediction 222 242 - -
Pral4403g00001 292 MobiDBLite consensus disorder prediction 222 239 - -
Pral4403g00001 292 Pfam Dof domain, zinc finger 63 118 IPR003851 GO:0003677|GO:0006355
Pral4403g00001 292 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
Pral4403g00001 292 MobiDBLite consensus disorder prediction 108 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4403g00001 Pral-Chr4403 5826 7380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4403g00001 26 291 C2C2-Dof Transcription Factor Family AT3G55370 42.333 8.00e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4403g00001 zf-Dof 1.3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4403g00001 - - gmx:100816635 338.576