Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00100 ATGGGATTTTATAGCCAAAGTTTCAGGTTTGAAGGTGGCGGGAGAATAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGGTGGGTTAATTACCTGCATCCTGGTCTCAAACGGGGTAAGATGACGCCCCAAGAAGAGCGTCTCGTGCTGGAGCTTCACGCCAAATGGGGAAATAGATGGTCAAGAATTGCTCGGAAATTGCCAGGGCGCACAGATAATGAGATCAAGAATTACTGGAGGACTTACATGAGGAAGAAGGCCCAGGAGACAAAGCGGGCGGCCACTCCATCATCAACATCTAGTTGTCATTCTTCACTATCATCAAATAATCACGCAGTGGGTTCACATCCTTCCAATGAGAGTGGAGAGGAAAGCTTTTATGATACAGGAGGGCCTAATATGATTGACTCAACAAAAATCAAGATAGGGGATGAAAAAGGGGAACAGGGTTACTCCATGGATGACATATGGAAAGATATTGCTCTGTCAGAAGATCATGTTCAGAATCCAGTCCATGCTAGTGCTGGGCATATCGAAGAGGAATGCAACTTCTTTTGTGCTCATCTGCCATCTCCTTCTTGGGAGTATTCTTCAGACTCGCTGTGGGTTATGGATGACGAAGAAAGTAAGACGTTTCTCCCTTCAAGTGATCAATTCTTTTCCAGTTTTGAACAAGGGGCAGCATTTCTAACTGGCTAA 702 0.4487 MGFYSQSFRFEGGGRIGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSRIARKLPGRTDNEIKNYWRTYMRKKAQETKRAATPSSTSSCHSSLSSNNHAVGSHPSNESGEESFYDTGGPNMIDSTKIKIGDEKGEQGYSMDDIWKDIALSEDHVQNPVHASAGHIEEECNFFCAHLPSPSWEYSSDSLWVMDDEESKTFLPSSDQFFSSFEQGAAFLTG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00100 233 ProSiteProfiles Myb-like domain profile. 34 84 IPR001005 -
Pral4402g00100 233 Gene3D - 9 38 - -
Pral4402g00100 233 MobiDBLite consensus disorder prediction 87 134 - -
Pral4402g00100 233 CDD SANT 41 84 IPR001005 -
Pral4402g00100 233 FunFam MYB transcription factor 41 107 - -
Pral4402g00100 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 34 88 IPR017930 -
Pral4402g00100 233 Gene3D - 41 112 - -
Pral4402g00100 233 MobiDBLite consensus disorder prediction 93 127 - -
Pral4402g00100 233 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 108 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pral4402g00100 233 SUPERFAMILY Homeodomain-like 19 89 IPR009057 -
Pral4402g00100 233 Pfam Myb-like DNA-binding domain 39 83 IPR001005 -
Pral4402g00100 233 SMART sant 38 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00100 Pral-Chr4402 454412 455639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00100 1 226 MYB Transcription Factor Family AT3G46130 57.872 3.00e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4402g00100 Myb_DNA-binding 4.6e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00100 K09422 - twl:120001543 303.908