LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4402g00076	ATGTTGCCTGAGGCCGGCTCAGCTCCGACAAAGGGTTTTCAGTGCCAACCGGAGTCGGAGGTGAGCCACAGCAGTTGCAGCAGTGGGTGTAGCGGCCATGGATCGCCGACTTCTCTCATGAGTTGCCAAGGCGTGTTTCAGAGGAGCATAAGCAGCCATTCTCTGCAGAGGACTGAGGCCCACCACCCCGTTTCAGCTTTATTCGCAGACTTGCTGGAGGAGGCCCCGAGGATGATGAATGTATTGCGAAACCATCGGCGGTCGGAAAGTCCATTGCGGAGCGAAAGTAGTATGATCATCGAAGGAATGAGCAGAGCGTATCCTTATGGCCCGGAGGAGAAGAAGGTGAGGATTGAGAGATACAGAATCAAGAGACATAAGAGGAACTTCAACAAGAAAATTAAGTATGAATGCAGGAAGACGTTGGCGGACAGCAGGAGGCGCGTCAGAGGAAGATTTGCAAAGAGGGAAGAAAGTGAGAAGAAGAGAGATGTGATAGAGAATGAGAGTGGAGAAGAAGAAGATGAAAATTGGGACAGTTTTTTTGAAACATTGGTAGATGCAAATCTTGTTCAGGAACCATGA	585	0.4957	MLPEAGSAPTKGFQCQPESEVSHSSCSSGCSGHGSPTSLMSCQGVFQRSISSHSLQRTEAHHPVSALFADLLEEAPRMMNVLRNHRRSESPLRSESSMIIEGMSRAYPYGPEEKKVRIERYRIKRHKRNFNKKIKYECRKTLADSRRRVRGRFAKREESEKKRDVIENESGEEEDENWDSFFETLVDANLVQEP	194

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4402g00076	194	Coils	Coil	156	176	-	-
	Pral4402g00076	194	PANTHER	ZINC FINGER PROTEIN CONSTANS-LIKE 4	22	170	IPR045281	GO:0009909
	Pral4402g00076	194	MobiDBLite	consensus disorder prediction	152	177	-	-
	Pral4402g00076	194	ProSiteProfiles	CCT domain profile.	114	156	IPR010402	GO:0005515
	Pral4402g00076	194	MobiDBLite	consensus disorder prediction	152	168	-	-
	Pral4402g00076	194	Pfam	CCT motif	116	156	IPR010402	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4402g00076	Pral-Chr4402	363227	364417	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4402g00076	102	166	C2C2-CO-like Transcription Factor Family	AT5G24930	44.615	4.17e-12	62.0

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Pral4402g00076		CCT	9.3e-16	CL0281

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4402g00076	-		-	qsa:O6P43_028305	180.259