Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00075 ATGTTGCCTGAGGCCGGCTCAGCTCCGACAAAGGGTTTTCAGTGCCAACCGGAGTCGGAGGTGAGCCACAGCAGTTGCAGCAGTGGGTGTAGCGGCCATGGATCGCCGACTTCTCTCATGAGTTGCCAAGGCGTGTTTCAGAGGAGCATAAGCAGCCATTCTCTGCAGAGGACTGAGGCCCACCACCCCGTTTCAGCTTTATTCGCAGACTTGCTGGAGGAGGCCCCGGTGAGAAAAGTTTACAGTGCCGGTGATTTGCAGAGGATGATGAATGTATTGCGAAACCATCGGCGGTCGGAAAGTCCATTGCGGAGCGAAAGTAGTATGATCATCGAAGGAATGAGCAGAGCGTATCCTTATGGCCCGGAGGAGAAGAAGGTGAGGATTGAGAGATACAGAATCAAGAGACATAAGAGGAACTTCAACAAGAAAATTAAGTATGAATGCAGGAAGACGTTGGCGGACAGCAGGAGGCGCGTCAGAGGAAGATTTGCAAAGAGGGAAGAAAGTGAGAAGAAGAGAGATGTGATAGAGAATGAGAGTGGAGAAGAAGAAGATGAAAATTGGGACAGTTTTTTTGAAACATTGGTAGATGCAAATCTTGTTCAGGAACCATGA 618 0.4935 MLPEAGSAPTKGFQCQPESEVSHSSCSSGCSGHGSPTSLMSCQGVFQRSISSHSLQRTEAHHPVSALFADLLEEAPVRKVYSAGDLQRMMNVLRNHRRSESPLRSESSMIIEGMSRAYPYGPEEKKVRIERYRIKRHKRNFNKKIKYECRKTLADSRRRVRGRFAKREESEKKRDVIENESGEEEDENWDSFFETLVDANLVQEP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00075 205 MobiDBLite consensus disorder prediction 163 188 - -
Pral4402g00075 205 ProSiteProfiles CCT domain profile. 125 167 IPR010402 GO:0005515
Pral4402g00075 205 Coils Coil 167 187 - -
Pral4402g00075 205 Pfam CCT motif 127 167 IPR010402 GO:0005515
Pral4402g00075 205 MobiDBLite consensus disorder prediction 163 179 - -
Pral4402g00075 205 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 20 181 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00075 Pral-Chr4402 363227 364417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00075 113 177 C2C2-CO-like Transcription Factor Family AT5G24930 44.615 5.04e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral4402g00075 CCT 1e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00075 - - qsa:O6P43_028305 203.756