Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00074 ATGGAGCAGTCAGAAAAACCAGCAAAGCAATCACAAAAAAGGTCATCATTTCCGAGAGACCCTCGTGGTTCGCTCGAAGTGTTCAACCCTTCCTCCTACTCAACGGACAGTCCATCAGATTCGCCGTTCCGATCTCAGCCAAAGTGGAAAACTTGGACAGAGCAACCGACCACCGCCACCCACAAGGATGAAGTCACCAGCACATCATGGATGGCCCTCAAGGACTCCAGTAGTCCATCGCAGCAGACTCTGTCCGCCATTCTTAACGAGCGACCTGAGCAGACCCCGAAATCCCCGTCCTCCGTGAATTTTGCCGGAGAAGTAGGCACGGCAGCGCAGAGAGCTGCTGAGTGGGGACTGGTGCTGAAGACTGACACGGAGACGGGGAAGCCGCAGGGAGTGGTTGTGAGAAACTCGGGAGGAGAGGAACCAAGTGCGAAGATCTCAGGTACCTCGAGAAGGAACTCAAATAACTCGGTGAGAAGCTCCGGTGACTCGTCGGAAGACGGAGGAAAAGAAATACGGGGATTTCCGAGAATTTCAGAGGATTTGAAGGATGCTTTGTCGATGTTCCAACAGACTTTCGTGGTCTCGGATGCGACCAAACCCGATTATCCGATCATGTATGCTAGTGCCGGATTCTTTAAGATGACGGGTTATACTTCCAAGGAGGTCATTGGAAGGAACTGTCGCTTTTTACAGGGAGCGGGTACGGATCCGGAGGACGTGGCAAAGATAAGGGAGGCGCTGCAAGCAGGGACGAGTTACTGTGGAAGATTACTGAATTACAAGAAAGATGGCACTCCTTTCTGGAACCTCCTCACCATTTCACCCATCAAGGACGACGATGGCCAAGTCCTCAAATTTATTGGAATGCTAGTAGAGGTTAGCAAGCATACGGAGGGGTCCAAGGAGAAGACGCTACGTCCCAATGGATTACCCGAATCTTTGATTCGATATGATGTTCGTCAAAAAGAGAAGGCTTCCTCTGCAGTATCTGAGTTAGTAAAGGCAGTGAAGCGGCCCCGAGCAGTCAGTGAATCAGGAAAACGTCCATTGATAAGAAAATCTGGAGGTGATGAAGAACATAAAGTAGAAAGTTTGCCAAGGAGGAAATCAGAGAGCGTTGCTGCATTAAGGCCAAAACCACATGGGGGGCGTCGAAATTCAATGCAGCAAATCAATGAGCTGCCTGAAAAGAAACAGAAAAATCGTCGTCGTTCTTTCATGGGGTTCATTAAAAAAAGTCAGCCCAATGATGAGAGCTTTGAAGACAATGAAATTGTGGAGGGCAGCTCAGGGAGTGAGGAAGAAGATGAGAGGCCTGATAGTATTGATGACAACAAACTAGCGCAAAGGGAGAAGCGAAAGGGTCTTGATCTTGCAACAACACTTGAGCGTATTGAGAAGAACTTTGTCATTACAGATCCAAGATTGCCTGATAATCCCATCATCTTCGCATCTGATAGTTTCCTAGAACTCACCGAGTACAGTCGTGAAGAAATTTTGGGAAGAAATTGCAGGTTTTTGCAAGGGCCTGAAACTGATCCAGCAACTGTGAGAAAAATTAGAGAGGCGATTGATAACCAAACAGACGTTACGGTGCAGCTGATTAATTATACAAAGAGTGGCAAAAAGTTCTGGAACTTGTTTCATCTGCAAGCTATGCGTGATCAAAAGGGAGAAGTACAATATTTTATTGGAGTTCAACTTGATGGTAGCCAGCATGTGGAACCTCTTCACAACTGTATTGCAGAAAACACGGCAAAGGAGGGAGAACAGTTGGTTAAACAAACTGCAGAAAATGTTGATGAGGCAGTGAGAGAACTTCCGGATGCGAATTTGACACCAGAAGATTTATGGTTAAACCACTCAAAAGTGGTCCTTCCAAAACCTCATAGGAAGGATAACCCTGCTTGGAGTGCTATCCTGAAGATCCTGGAAAGTGGAGAGCAGATAGGCTTGAACCATTTTAGGCCAATCAAACCTTTGGGATCTGGGGACACTGGCAGTGTGCATTTGGTGGAGCTATGTGGAACTGGCCAATATTTTGCCATGAAGGCTATGGACAAGGGTGTTATGCTAAATCGCAACAAGGTGCATAGAGCTTGCACAGAGAGAGAAATCCTCGACATGTTGGATCATCCTTTTCTTCCCGCATTATATGCTTCTTTTCAGACCAAAACGCATATTTGCCTGATAACTGATTATTGTCCCGGTGGAGAACTGTTCCTGCTTCTAGACCGGCAGCCAACAAAAGTTATCAAAGAAGATGCAGCAAGGTTTTACGCTGCTGAGGTTGTGGTTGCCCTGGAGTACCTTCATTGTCAAGGAATAATATATCGGGATTTGAAGCCAGAGAATGTATTACTCCAGAGCAACGGGCATGTGTCTCTGACAGATTTTGACTTGTCATGTTTAACATCCAGCAAACCACAGCTTTTAATTCTACCTTCAAATGAAAAGAAGAAACAGAAGGGACAACAAACTCCAATATTTGTGGCCGAACCTATGAGAGCTTCAAATTCTTTTGTTGGCACAGAAGAGTACATTGCTCCGGAAATTATAACTGGTTCAGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGCATTCTTCTGTATGAAATGATGTATGGATATACACCATTCAGGGGGAAGACAAGGCAGAAAACATTTGCTAATATTCTTCACAAGGATCTTAAATTTCCCAAAAGTAAACCGGTAAGTCTCCATGGAAAGCAGTTGATACACAGGTTGTTGCACAGAGATCCCAAAAACCGATTGGGCTCACAGGAAGGAGCAAACGAAATAAAGCGGCACCCATTCTTCAAAGGTGTCAATTGGGCCCTCGTTCGTAGCATGAACCCTCCTGACCTGGACGCTCCTCTCTTCCGGGCAACTGAAGATGAGAAGGAAGTCAGAATTGTTGATCCTGCACTGGAGCAACTGCCAACAGATTATTTCTGA 2970 0.4609 MEQSEKPAKQSQKRSSFPRDPRGSLEVFNPSSYSTDSPSDSPFRSQPKWKTWTEQPTTATHKDEVTSTSWMALKDSSSPSQQTLSAILNERPEQTPKSPSSVNFAGEVGTAAQRAAEWGLVLKTDTETGKPQGVVVRNSGGEEPSAKISGTSRRNSNNSVRSSGDSSEDGGKEIRGFPRISEDLKDALSMFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGAGTDPEDVAKIREALQAGTSYCGRLLNYKKDGTPFWNLLTISPIKDDDGQVLKFIGMLVEVSKHTEGSKEKTLRPNGLPESLIRYDVRQKEKASSAVSELVKAVKRPRAVSESGKRPLIRKSGGDEEHKVESLPRRKSESVAALRPKPHGGRRNSMQQINELPEKKQKNRRRSFMGFIKKSQPNDESFEDNEIVEGSSGSEEEDERPDSIDDNKLAQREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDNQTDVTVQLINYTKSGKKFWNLFHLQAMRDQKGEVQYFIGVQLDGSQHVEPLHNCIAENTAKEGEQLVKQTAENVDEAVRELPDANLTPEDLWLNHSKVVLPKPHRKDNPAWSAILKILESGEQIGLNHFRPIKPLGSGDTGSVHLVELCGTGQYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLDRQPTKVIKEDAARFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSNGHVSLTDFDLSCLTSSKPQLLILPSNEKKKQKGQQTPIFVAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMMYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSLHGKQLIHRLLHRDPKNRLGSQEGANEIKRHPFFKGVNWALVRSMNPPDLDAPLFRATEDEKEVRIVDPALEQLPTDYF 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00074 989 MobiDBLite consensus disorder prediction 1 20 - -
Pral4402g00074 989 SMART pas_2 182 251 IPR000014 -
Pral4402g00074 989 SMART pas_2 459 528 IPR000014 -
Pral4402g00074 989 FunFam LOV domain-containing protein 446 610 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 1 108 - -
Pral4402g00074 989 CDD STKc_phototropin_like 657 963 - -
Pral4402g00074 989 FunFam Putative LOV domain-containing protein 194 350 - -
Pral4402g00074 989 CDD PAS 472 572 IPR000014 -
Pral4402g00074 989 FunFam LOV domain-containing protein 657 741 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 339 452 - -
Pral4402g00074 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 779 791 IPR008271 GO:0004672|GO:0006468
Pral4402g00074 989 SUPERFAMILY Protein kinase-like (PK-like) 639 969 IPR011009 -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 123 175 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 27 107 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 423 443 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 144 165 - -
Pral4402g00074 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 201 293 IPR035965 -
Pral4402g00074 989 SMART serkin_6 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00074 989 Gene3D Phosphorylase Kinase; domain 1 657 741 - -
Pral4402g00074 989 ProSiteProfiles PAC domain profile. 531 585 IPR000700 -
Pral4402g00074 989 ProSiteProfiles PAS repeat profile. 457 530 IPR000014 -
Pral4402g00074 989 ProSiteProfiles PAC domain profile. 254 308 IPR000700 -
Pral4402g00074 989 FunFam Putative LOV domain-containing protein 742 956 - -
Pral4402g00074 989 MobiDBLite consensus disorder prediction 340 378 - -
Pral4402g00074 989 NCBIfam PAS domain S-box protein 207 301 IPR000014 -
Pral4402g00074 989 NCBIfam PAS domain S-box protein 482 572 IPR000014 -
Pral4402g00074 989 Pfam PAS domain 480 572 IPR000014 -
Pral4402g00074 989 Pfam PAS domain 201 297 IPR000014 -
Pral4402g00074 989 Pfam Protein kinase domain 660 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00074 989 Gene3D Transferase(Phosphotransferase) domain 1 742 957 - -
Pral4402g00074 989 ProSiteProfiles PAS repeat profile. 180 251 IPR000014 -
Pral4402g00074 989 ProSiteProfiles Protein kinase domain profile. 658 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00074 989 CDD PAS 207 296 IPR000014 -
Pral4402g00074 989 Gene3D PAS domain 194 349 - -
Pral4402g00074 989 SUPERFAMILY PYP-like sensor domain (PAS domain) 473 572 IPR035965 -
Pral4402g00074 989 Coils Coil 589 609 - -
Pral4402g00074 989 ProSitePatterns Protein kinases ATP-binding region signature. 664 687 IPR017441 GO:0005524
Pral4402g00074 989 PANTHER FLIPPASE KINASE 1-RELATED 156 962 - -
Pral4402g00074 989 SMART pac_2 534 576 IPR001610 -
Pral4402g00074 989 SMART pac_2 257 299 IPR001610 -
Pral4402g00074 989 Gene3D PAS domain 446 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00074 Pral-Chr4402 349245 359250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00074 1 989 AGC Kinase Gene Family AT3G45780 69.804 0.0 1361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4402g00074 Pkinase 4.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00074 K20715 - jre:108989640 1509.2