Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00065 ATGCCATTAGGATCTTTGGAGAACCACTTGCATGATCTTCCACCCGGTAGAAAACCACTTGACTGGAACACGAGAATGCAAATAGCAGCCGGAGCTGCAAAGGGCTTGGAGTATTTACATGAGAAAATGAAGCCCCCGGTCATATACCGTGATTTGAAATGCTCAAACATCTTATTAGGTGAAGGATATCATCCCAAGTTATCTGATTTTGGTTTGGCCAAAGTAGGCCCAAGCGGCGATAAGACACATGTTTCAACAAGGGTTATGGGCACGTATGGTTACTGTGCTCCAGATTATGCAATGACGGGTCAGTTGACGTTCAAGTCAGACATCTACAGCTTTGGCGTTGTTCTTTTGGAGCTCATCACAGGCAGGAAAGCCATTGATAACGCTAGACCTGCCAAAGAACAAAATCTGGTTGCATGGGCAAGGCCGTTGTTCAAAGACAGGAGAAAATTCTCCCAAATGGTAGACCCATTGCTGGAAGGCCAGTATCCCGTGAGAGGTTTGTACCAAGCTCTGGCTATTGCTGCCATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTGATAACCGACGTGGTTACCGCATTAAACTACCTTGCCTCCCAGAGATATGATCCCCGAACTCATCATCAAGTACACAACTCCAGAAGAAGGGATGACGATCAAACACATCTTGCTCGTAATGGTTCTTCCTCGGACAGATCATCAGATTAA 720 0.4625 MPLGSLENHLHDLPPGRKPLDWNTRMQIAAGAAKGLEYLHEKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNARPAKEQNLVAWARPLFKDRRKFSQMVDPLLEGQYPVRGLYQALAIAAMCVQEQPNMRPVITDVVTALNYLASQRYDPRTHHQVHNSRRRDDDQTHLARNGSSSDRSSD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00065 239 SMART serkin_6 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00065 239 FunFam Serine/threonine-protein kinase PBS1 1 217 - -
Pral4402g00065 239 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00065 239 SUPERFAMILY Protein kinase-like (PK-like) 1 202 IPR011009 -
Pral4402g00065 239 MobiDBLite consensus disorder prediction 208 229 - -
Pral4402g00065 239 Gene3D Transferase(Phosphotransferase) domain 1 1 226 - -
Pral4402g00065 239 PANTHER OS07G0668900 PROTEIN 1 210 - -
Pral4402g00065 239 MobiDBLite consensus disorder prediction 206 239 - -
Pral4402g00065 239 Pfam Protein kinase domain 4 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00065 239 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Pral4402g00065 239 PIRSF ILK 1 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00065 Pral-Chr4402 326606 342568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00065 1 203 Glycoside Hydrolase AT3G07070 65.025 1.22e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pral4402g00065 Pkinase 4.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00065 - - zju:107411135 416.772