Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00063 ATGTTCGACCTTAATCTGAATGCCGATTCGACTGATGCCTCTCGTAACGATGAACTCATCAGGTTCTCTGACGAGCTAACGGAAGCCTCAGGGAATCAAATGGCGAAATCGGGGACTTCCAATTCCTCTAATGTCTATGCTGACGGGTCCAGCAATGGAGGAGATGAGGACTCCTGCTCTACACGCGGTGGGGACGCCTTCACCTTTAATTTCGATATCCTTAAGGAGGAAGGCGTGCAAGAAGTCGCAACCAAGGAGCTATTTCTGTTTAATGAAACTAAAGGGGTGGACGGCGAGTCTGCGAATTGGCAGGGTCAGTCCTTGTCTGCCCTTCCATCGAGAAAGAGCTGGATGAGTCTTTCCTTTGATCATCAGGTTGGTAACGGAGAGATGAAGATGGTCCAAGTTCAGCAACAACCACGACAGCAAGTAAAGAAGAGCAGAAGGGGTCCAAGGTCTCGGAGCTCGCAGTACAGAGGGGTCACCTTTTACAGAAGGACTGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAGCAAGTCTATTTGGGTGGTTTTGATACTGCTCATGCCGCTGCCAGAGCCTACGACCGTGCTGCTATTAAGTTCAGGGGAGTTGATGCTGACATCAATTTCAATCTCAATGATTACGAGGAGGATCTTAAGCAGACGAAAAATCTCACCAAAGAGGAATTCGTACACATACTTCGTCGCCAGAGTACTGGTTTCTCAAGGGGGAGCTCAAAATACCGAGGAGTAACACTGCACAAGTGTGGTCGCTGGGAGGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGATAAGGCAGCTATCAAATGCAACGGAAGGGAGGCAGTGACCAACTTTGAACTAAGAACATACGAAGGGGAGATGAAGCCTGAGGTCATTACTGAAGGTGGCGGTCATAATCTTGACCTCAAATTGGGCATAGCTACACCAGGCAGTGGCCTAGAAGAAAATAGGGGCCTTCAGTTGCAACCTATCCCTTACAACATGCTAACTGGAAGAAGTTCAAGGATGGATATCAATATTGATTCAGCAAATGGTGATCCATCGCTGAAAAGGCCAGTTGGTACTGAGGAGCGTCCTTTTGCATGGAATGGCGTCTATCCTGGTTTCTTTCCTAACCAGGAAAGGGTTAAGAGAATCAGTAGAGATCATTCACAAGGACTGCCTCAATGGGGCTGGCAAACGCAAGGCCAGGTTCCTGCTACGCCATTACCACCGTTCTCTACTGCAGCATCATCAGGATTCTCAATTTCAGCTACCATTCCATTGGCTACCATCTTTCCAACAAAATCTCTGAGCTTGACCTCAGTTCCCCGTGATATCTGTTTTGATCCATCTAGTGCAGCCGGAGGCAACACAACTCAACATTGCCAGATGAAGTCCCCGCACGCAGCCCCCTAG 1434 0.4854 MFDLNLNADSTDASRNDELIRFSDELTEASGNQMAKSGTSNSSNVYADGSSNGGDEDSCSTRGGDAFTFNFDILKEEGVQEVATKELFLFNETKGVDGESANWQGQSLSALPSRKSWMSLSFDHQVGNGEMKMVQVQQQPRQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLNDYEEDLKQTKNLTKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFELRTYEGEMKPEVITEGGGHNLDLKLGIATPGSGLEENRGLQLQPIPYNMLTGRSSRMDINIDSANGDPSLKRPVGTEERPFAWNGVYPGFFPNQERVKRISRDHSQGLPQWGWQTQGQVPATPLPPFSTAASSGFSISATIPLATIFPTKSLSLTSVPRDICFDPSSAAGGNTTQHCQMKSPHAAP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00063 477 MobiDBLite consensus disorder prediction 30 59 - -
Pral4402g00063 477 Pfam AP2 domain 157 205 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 CDD AP2 248 291 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 Gene3D AP2/ERF domain 156 215 IPR036955 GO:0003700|GO:0006355
Pral4402g00063 477 ProSiteProfiles AP2/ERF domain profile. 157 213 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 121 322 - -
Pral4402g00063 477 FunFam AP2-like ethylene-responsive transcription factor 156 215 - -
Pral4402g00063 477 SMART rav1_2 157 219 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 SMART rav1_2 249 297 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 MobiDBLite consensus disorder prediction 135 158 - -
Pral4402g00063 477 MobiDBLite consensus disorder prediction 30 58 - -
Pral4402g00063 477 SUPERFAMILY DNA-binding domain 156 214 IPR016177 GO:0003677
Pral4402g00063 477 CDD AP2 157 212 IPR001471 GO:0003700|GO:0006355
Pral4402g00063 477 SUPERFAMILY DNA-binding domain 248 292 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00063 Pral-Chr4402 306935 311064 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00063 1 477 AP2-EREBP Transcription Factor Family AT5G60120 42.941 8.93e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4402g00063 AP2 6.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00063 K09284 - gmx:100788303 600.127