Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00058 ATGGTTACCCGGAAAATGGAGCAGTTCATAGATAACATGCCGTCAGTGGACCTGATGCGCTCGGAGAAGATGACCTTCGTTCAACTCATCATCCCTGTTGAGTCCGCTCATCGGGCCGTCACTTATTTGGGCGAACTCGGCCTCTTCCAATTCCGAGATTTAAATGATGATAAAAGCCCTTTCCAGAGAACATTTGTTAACCAGGTCAAGCGATGTGCAGAAATGTCAAGAAAGCTACGATTCTTCAAAGACCAAATCAACAAAGCTGGTCTTATGTCTTCTCCTCATCCTGTTTTGCAACCAGATATTGAGTTGGAGGAACTAGAGTATCAACTTGCTGAGCATGAACATGAGCTAATTGAACTGAACTCTAACAGCGAGAAACTTCATCAATCATATAATGAGCTCCTGGAGTTTAGGATTGTTTTGCAGAAGGCACATGGTTTTCTGGCCTCAAATCATAGCCATGAATTTCCAGAGAGGGAGCTGGAGGAGCATGTATACTCAAATGATGGTTTTGTTGACACAGGATCTTCACTTGAGAAGGAAATGAAGCCTGGCTCATCATATCAATCTGGTTTAAGATTCATCAGCGGAATAATTTGTAAATCCAAGGTTCTTAGGTTTGAAAGGATGTTGTTTCGAGCTACAAGAGGCAATTTGCTTTTCAATCAGGCTGCAACTGATGAGCTCATAGAGGATCCCGTTTCAAATGAGAAGATAGAGAAAACAGTGTTTGTCGTGTTCTTCTCTGGGGAGCAGGCAAGAACAAAAATTCTTAAAATCTGTGAGACATTTGGTGCACATTGCTACCCTATCCCTGAAGATATAACTAAGCAAAGACAAATAAGTAGGGAGGTCTCATCACGCCTTTCTGACTTAGAGGCGACTTTGGATGCTGGGATTAGGCACCGGAATAAGGCCCTAGCTTCTGTAGAGGCTCATCTAGCAAAATGGATAAACATGGTAAGAAGAGAGAAGGCTGTGTATGATACCCTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTCGTTGGAGAGGGTTGGTGCCCTGTATTTGCAAAAACGCAGATTCAGGAGGCACTGCAGCGTGCAACTTTTGATAGCAGCTCTCAGGTTGGCATAATCTTCCATCCAATGGATGCAGTGGAATCACCACCCACATATTTTAGGATCAACCGCTTTACGAGTGCATATCAGGAAATTGTTGATGCATATGGTGTTGCAAGATACGAAGAAGCAAATCCTGCAGTTTACACAGTTATTACATTCCCGTTTCTTTTTGCGGTGATGTTTGGGGACTGGGGTCATGGAATTTGCTTGTTGCTGGGGGCATTGGTTCTTATAGCACGTGAAAGCAAGCTCAGTAAGCAGAGACTTGGAAGCTTTATGGAGATGATATTTGGTGGCCGTTATGTGCTTCTTTTGATGTCGTTGTTTTCAATCTACTGTGGGTTAATCTACAATGAATTCTTCTCTGTTCCTTTTCACATTTTTGGGAAGTCTGCTTACACATGCCGAGACACTTCATGTAGGGATGCACGTACTGCTGGCTTAGTCAAATCACGAAATACATACCCATTTGGGGTGGACCCTAGCTGGCGTGGAAGTCGTTCAGAACTGGCTTTTCTCAATTCTCTCAAGATGAAGATGTCCATTCTTTTAGGTGTGGCGCAGATGAACTTAGGGATTATATTAAGCTACTTCAATGCGCATTATTTTGGCAGCTCAGTGGATATAAGGTACCAGTTTGTGCCACAGATGATTTTTCTGAACAGTCTCTTTGGGTATCTTTCTCTTCTCATTGTCGTTAAGTGGTGCAATGGTTCTCAGGCAGACCTTTATCATGTAATGATATACATGTTTCTTAGCCCCACTGATAATCTTGGTGAAAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTGTTGCTGTTGGCTTTAATTGCAATTCCTTGGATGCTGTTTCCAAAACCCTTTATCCTAAAGAAGCTTCACCACGAGAGATTCCAAGGACGCACTTATGGTATGCTTACTACCACTGAGATGGATCTCGAGGAGGAACCAGATTCTGCCAGGCAACATCATGAGGAATTCAATTTCAGTGAGGTCTTTGTTCATCAAATGATCCACTCTATCGAATTTGTTCTAGGCGCAGTTTCAAATACTGCATCATATCTTCGACTTTGGGCATTAAGCTTGGCCCACTCAGAGCTTTCAACTGTTTTTTACGAGAAAGTGCTACTTCTTGCTTGGGGGTATGACAATCTTGTTATCCGGTTAGTGGGGCTGGCCGTCTTTGCCTTCGCAACTGCCTTTATTCTTCTCATGATGGAAACCCTCAGCGCTTTTCTCCATGCACTGCGCCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGCGATGGCTACAAGTTCAGACCTGTTTCCTTTGCCTCGTTAACAGAGGACGATGATTGA 2472 0.4292 MVTRKMEQFIDNMPSVDLMRSEKMTFVQLIIPVESAHRAVTYLGELGLFQFRDLNDDKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLMSSPHPVLQPDIELEELEYQLAEHEHELIELNSNSEKLHQSYNELLEFRIVLQKAHGFLASNHSHEFPERELEEHVYSNDGFVDTGSSLEKEMKPGSSYQSGLRFISGIICKSKVLRFERMLFRATRGNLLFNQAATDELIEDPVSNEKIEKTVFVVFFSGEQARTKILKICETFGAHCYPIPEDITKQRQISREVSSRLSDLEATLDAGIRHRNKALASVEAHLAKWINMVRREKAVYDTLNMLNFDVTKKCLVGEGWCPVFAKTQIQEALQRATFDSSSQVGIIFHPMDAVESPPTYFRINRFTSAYQEIVDAYGVARYEEANPAVYTVITFPFLFAVMFGDWGHGICLLLGALVLIARESKLSKQRLGSFMEMIFGGRYVLLLMSLFSIYCGLIYNEFFSVPFHIFGKSAYTCRDTSCRDARTAGLVKSRNTYPFGVDPSWRGSRSELAFLNSLKMKMSILLGVAQMNLGIILSYFNAHYFGSSVDIRYQFVPQMIFLNSLFGYLSLLIVVKWCNGSQADLYHVMIYMFLSPTDNLGENQLFWGQRPLQIVLLLLALIAIPWMLFPKPFILKKLHHERFQGRTYGMLTTTEMDLEEEPDSARQHHEEFNFSEVFVHQMIHSIEFVLGAVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLVIRLVGLAVFAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPVSFASLTEDDD 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00058 823 Pfam V-type ATPase 116kDa subunit family 42 815 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral4402g00058 823 Coils Coil 105 132 - -
Pral4402g00058 823 PANTHER VACUOLAR PROTON ATPASES 18 822 IPR002490 GO:0033179|GO:0046961|GO:1902600
Pral4402g00058 823 PIRSF ATP6V0A1 14 823 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00058 Pral-Chr4402 279007 288201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00058 6 816 Primary Pumps ATPases(2) AT2G28520 79.018 0.0 1335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00058 K02154 - zju:107411281 1437.94