Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00036 ATGGATTTTTGTAATTGCTTCGGGTTCATCCGAAAATCTAAACAGCAGAGTGCTAAGTTTGGTATCAATAATAATCTCTCTCAGGAGCTATTGTTGGATGAAGACATTGAAGACGAGGGTGGCTCATATGATGGTGAGGTTACTAACATCAGCAGTGGAGATGATGGCGAAGTGCAAATTCATGCCAACCGGTCTGAGGATATTTTGAAACTGAGAGCACAGAGTGACATGATTTGTAGGCAATTTCCTGTGAAGGAAACTCACAAAGTTGTTCGTACAGAGGTTTTATATCGAAGTTCTGTTGATGGTAAGCACTATGCAATAAAGGTCTTTCACAAGTCTCATTTACTGAAGCTTCGAGTTGCTCCCTCAGAGACTGCCATGACAGATGTTCTGCGTGAGGTACTCATCATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGGTGATTGATGACCCAGAGTCAGATCACTTTTACATGGTACTTGAATATGTGGAAGGCAAATGGGTCTGTGAGGGTACAGGACCTCTTTGTCGCTTAGGTGAGGAGACTGCTAGGAGATACGTGCGTGACATTGTTTCAGGATTAACGTATCTACATGCTCATAATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTCGCCATGGTACGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGATAATGATGAACTCCGTCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCATGGCAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATACTGGGTGAATATCCATTTCTTGGTGATACTCTTCAAGATACTTACGATAAAATAGTGAATAACCCTTTAGTGCTTCCAGATAGTTTGAACATGCAATTGAAGAACTTGCTAGAAGGACTGCTTTGCAAAGATCCAAAACTAAGGTTGACATTAGGTGATGTTGCGAAGCATAGCTGGGTTATAGGAGACTATGGTCCAATTCCTGAGTACTTGTGTTGCTGTAAACGCAAGAGCTTGGAGAGGAGAGACTTAGATAGGAGCAATATACTTGCTTGA 1119 0.4218 MDFCNCFGFIRKSKQQSAKFGINNNLSQELLLDEDIEDEGGSYDGEVTNISSGDDGEVQIHANRSEDILKLRAQSDMICRQFPVKETHKVVRTEVLYRSSVDGKHYAIKVFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDHFYMVLEYVEGKWVCEGTGPLCRLGEETARRYVRDIVSGLTYLHAHNIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDSLNMQLKNLLEGLLCKDPKLRLTLGDVAKHSWVIGDYGPIPEYLCCCKRKSLERRDLDRSNILA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00036 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pral4402g00036 372 SMART serkin_6 82 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00036 372 SUPERFAMILY Protein kinase-like (PK-like) 99 353 IPR011009 -
Pral4402g00036 372 ProSiteProfiles Protein kinase domain profile. 44 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00036 372 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 90 345 - -
Pral4402g00036 372 Pfam Protein kinase domain 100 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00036 372 FunFam Serine/threonine-protein kinase GRIK2 88 369 - -
Pral4402g00036 372 Gene3D Transferase(Phosphotransferase) domain 1 90 367 - -
Pral4402g00036 372 CDD STKc_LKB1_CaMKK 95 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00036 Pral-Chr4402 148262 154138 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00036 98 348 CBL-interacting serine-threonine protein kinases AT5G35410 34.263 7.73e-43 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pral4402g00036 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00036 K00908 - gmx:100776013 577.015