Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00034 ATGGATTTTTGTAATTGCTTCGGGTTCATCCGAAAATCTAAACAGCAGAGTGCTAAGTTTGGTATCAATAATAATCTCTCTCAGGAGCTATTGTTGGATGAAGACATTGAAGACGAGGGTGGCTCATATGATGGTGAGGTTACTAACATCAGCAGTGGAGATGATGGCGAAGTGCAAATTCATGCCAACCGGTCTGAGGATATTTTGAAACTGAGAGCACAGAGTGACATGATTTGTAGGCAATTTCCTGTGAAGGAAACTCACAAAGTTGTTCGTACAGAGGATGAAAATGGAAACAAGATGATAAATGAGTATGTTCGTGAATATAGGATAGGTGCTGGTAGCTATGGGAAAGTGGTTTTATATCGAAGTTCTGTTGATGGTAAGCACTATGCAATAAAGGTCTTTCACAAGTCTCATTTACTGAAGCTTCGAGTTGCTCCCTCAGAGACTGCCATGACAGATGTTCTGCGTGAGGTACTCATCATGAAAATGCTGGAACATCCTAATATAGTCAATCTCATTGAGAATATTGTGCATGGGGATATTAAACCTGATAATCTGTTGGTTACTCGCCATGGTACGGTGAAGATAGGGGATTTCAGTGTCAGCCAGGCATTTGAGGATGATAATGATGAACTCCGTCGGTCCCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCATGGCAAAGCTGCAGACACATGGGCAGTAGGAGTTACTTTGTACTGTATGATACTGGGTGAATATCCATTTCTTGGTGATACTCTTCAAGATACTTACGATAAAATAGTGAATAACCCTTTAGTGCTTCCAGATAGTTTGAACATGCAATTGAAGAACTTGCTAGAAGGACTGCTTTGCAAAGATCCAAAACTAAGGTTGACATTAGGTGATGTTGCGAAGCATAGCTGGGTTATAGGAGACTATGGTCCAATTCCTGAGTACTTGTGTTGCTGTAAACGCAAGAGCTTGGAGAGGAGAGACTTAGATAGGAGCAATATACTTGCTTGA 1032 0.4138 MDFCNCFGFIRKSKQQSAKFGINNNLSQELLLDEDIEDEGGSYDGEVTNISSGDDGEVQIHANRSEDILKLRAQSDMICRQFPVKETHKVVRTEDENGNKMINEYVREYRIGAGSYGKVVLYRSSVDGKHYAIKVFHKSHLLKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIENIVHGDIKPDNLLVTRHGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDSLNMQLKNLLEGLLCKDPKLRLTLGDVAKHSWVIGDYGPIPEYLCCCKRKSLERRDLDRSNILA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00034 343 ProSitePatterns Serine/Threonine protein kinases active-site signature. 178 190 IPR008271 GO:0004672|GO:0006468
Pral4402g00034 343 SUPERFAMILY Protein kinase-like (PK-like) 100 325 IPR011009 -
Pral4402g00034 343 Pfam Protein kinase domain 176 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00034 343 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Pral4402g00034 343 SMART serkin_6 105 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00034 343 Gene3D Phosphorylase Kinase; domain 1 87 179 - -
Pral4402g00034 343 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00034 343 CDD STKc_LKB1_CaMKK 111 312 - -
Pral4402g00034 343 FunFam Serine/threonine-protein kinase GRIK1 isoform A 149 319 - -
Pral4402g00034 343 Gene3D Transferase(Phosphotransferase) domain 1 180 336 - -
Pral4402g00034 343 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 64 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00034 Pral-Chr4402 148262 154139 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00034 111 319 CBL-interacting serine-threonine protein kinases AT5G35410 29.119 3.18e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Pral4402g00034 Pkinase 6.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00034 K00908 - gmx:100776013 506.138