Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4402g00003 ATGAAGCTGCAATTCAAAGTTGCTCTTGCTTCTGTTATTAGCTTGCTCTGGATTCAGCCCTCATTCTGTGATGGACCTTCTGGGAGCCTAAACAAATGGTTATGTAGGTGTTCTTTTCAAGGGAACCAGAGTTCCTCTCTCGCTAACTGTTCTACATCATGTGATTGCCGTTCAGATGCCAAAGAGAGTGCAGACTTATGGACATGCTTGTGTGACCCCACTGGGTTTCCTAATGTGGAAGCCGATGGTCATAGTTCGAATTGCTTTACTGCCTGCAACTGCACCTGGGGAGCTCTCACCATCTCACAAGGTTCGAACAAACACATTTCCAGCAAGACTGTTATAATTATACTCTTACTCAGTGTAATATGCACAACTGTTGCATTTCTTGCCTCAATCGCATGCTATGTACGGCGAAGGGACAAATGGCCTATTCAATCACCCATATTCTCATCAGACAACGAAACAAGTTACAATAGCACTGCCATCTTGATTAGTAATAGAACTTCAGTGCCAGAAACAAAAGCTGTTGCAAATTCTCCCTTTAATCTGATCTCAGGATGCTTTCGGACGGCCTCTTTCTTGTGTGGGAGCAAAGGAGAAACTTTTCATGGAAATACTATTCAATTTTCATTTGCAGTACTAGAAAATGCCACTGAAAAGTTTTCGGCTTCCAACCTGATTGGACTAGGCAGAAGTAGTTATGTATATCGTGGTCAACTGAAGGGTGGTACTAATGTGGCAGTGAAGCGACTAAGAGCTCAAGTGGGGACCGAAGCAGACTCTGAGTTTTTGACGGAGATTGAACTACTCTCTAGACTTCATCACTGTCACCTGGTGCCTTTGCTTGGATACTGCTTAGAATCAAAAGGGAAACATGTTGAGAGGTTACTTGTATTTAAGTACATGGCTAATGGCAATTTGAGGGACTGTTTGGATGGAGCTTCTGGAAAAAGTCTGGATTGGGCGACCCGTGTTACAGTTGCAATAGGAGCTGCAAGGGGATTGGAATACCTACATGAAGCGGCTGCTCCAAGAATTCTACATAGAGATGTTAAATCAACAAACATCCTTCTGGATGAAAATTATCAAGCAAAAATTACCGATCTTGGTATGGCTAAAAACTTACGAGCTGATGACTTCCCCAGCTGTTCAAATTCTCCAGCCAGAATGCAGGGCACATTTGGTTATTTTGCACCTGAATATGCAATTGTTGGAAGAGCCTCTCTTAAGTCAGACGTCTTCAGTTTTGGGGTGGTTCTTCTTGAGATTATCAATGGTCGAAAACCTATCTATAAATCTAAAGGCAAAGAAGAAAGCCTTGTCATATGGGCTGCTCCTCTCTTACAAGATAAAAGGCGCATAATAACCGAGTTAGCCGACCCACAATTAAAAGGAAACTTCCCGGAAAAGGAGATGCAGATAATGGCATATTGCAAGGAGTGTTTGCTGTTGGATCCTGATACTCGACCAACCATGAGTGAAGTCGTTCAAATTCTTTCAACTATATCGCCAGACAAATCTAGAAGGACAAGAAACATTCCAGTGATCCTTTTCCAGGAACCAAAGAATTCAGAGAAGCTAGAGCAAGTTCCATCTAGTAGAGTAGACACTGACCACAATCTTTGGGTCGGAAACCTCAATAATGAAGCAGATATAATTTCTGCTACGGATAGTTTGGTCCTCGCGACTCCAAAAGCTGGGAGCTGGTATGGATCCGAGGAAGAAATTGTAGACCTAACTGAGCCTCGGTTTGAATCATTTTGCGTGACAAACGTTAGTTCATCCTCATAA 1794 0.427 MKLQFKVALASVISLLWIQPSFCDGPSGSLNKWLCRCSFQGNQSSSLANCSTSCDCRSDAKESADLWTCLCDPTGFPNVEADGHSSNCFTACNCTWGALTISQGSNKHISSKTVIIILLLSVICTTVAFLASIACYVRRRDKWPIQSPIFSSDNETSYNSTAILISNRTSVPETKAVANSPFNLISGCFRTASFLCGSKGETFHGNTIQFSFAVLENATEKFSASNLIGLGRSSYVYRGQLKGGTNVAVKRLRAQVGTEADSEFLTEIELLSRLHHCHLVPLLGYCLESKGKHVERLLVFKYMANGNLRDCLDGASGKSLDWATRVTVAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENYQAKITDLGMAKNLRADDFPSCSNSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLEIINGRKPIYKSKGKEESLVIWAAPLLQDKRRIITELADPQLKGNFPEKEMQIMAYLXKECLLLDPDTRPTMSEVVQILSTISPDKSRRTRNIPVILFQEPKNSEKLEQVPSSRVDTDHNLWVGNLNNEADIISATDSLVLATPKAGSWYGSEEEIVDLTEPRFESFCVTNVSSSS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4402g00003 598 Gene3D Transferase(Phosphotransferase) domain 1 303 519 - -
Pral4402g00003 598 ProSiteProfiles Protein kinase domain profile. 222 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00003 598 SMART serkin_6 222 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4402g00003 598 FunFam receptor-like serine/threonine-protein kinase NCRK 196 302 - -
Pral4402g00003 598 Gene3D Phosphorylase Kinase; domain 1 193 302 - -
Pral4402g00003 598 PANTHER OS01G0750732 PROTEIN 66 520 - -
Pral4402g00003 598 ProSitePatterns Protein kinases ATP-binding region signature. 228 250 IPR017441 GO:0005524
Pral4402g00003 598 SUPERFAMILY Protein kinase-like (PK-like) 203 501 IPR011009 -
Pral4402g00003 598 FunFam receptor-like serine/threonine-protein kinase NCRK 303 513 - -
Pral4402g00003 598 CDD STKc_IRAK 228 501 - -
Pral4402g00003 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 347 359 IPR008271 GO:0004672|GO:0006468
Pral4402g00003 598 Pfam Protein tyrosine and serine/threonine kinase 225 501 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4402g00003 Pral-Chr4402 24768 30001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4402g00003 1 594 Receptor kinase-like Gene Family AT2G28250 54.333 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Pral4402g00003 PK_Tyr_Ser-Thr 7.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4402g00003 - - gmx:100817870 868.611