Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4401g00005 ATGTGTAAAACAAAAAAGGCCATCAACGCTGCCAGTCCTACCTCTACCCCTCGATCTTACAAGTCTCACCCCAATCCCAAATCCCCAAGACCAACCACATCCTCCCCCACCATCTCTTCCATCTCATTCCGACCATCAGATCAACACACCACCTCCATAAGTGACATGCTCGCTCCCCACGCCCCTGTTTCGAGCCCTCGCTCCTTTGCTAGTGCCACTCTCAGAGACACCCTACCTGAGAATCCCCACGTCTACCCCTTCTCTGAAATTTGCTCTGCCACTAACAATTTCACGGACAAGTACTGCTACTCTTCCTCTTCTACTCCCTCTTGGCGATGCACGCTTCGCGGCAGAGATGTTATTGTTTACCAGCACAAGTTTCGACGTCAAATCGGGACGACCCAGCACCAACAACGGCTCTCTCTAATTTGCCGCAGCCACCATGTTAGTATAATCAAGCTTCTCGGAGCTTCCATCTCCGACCACCATATCCACCTTGTGTACGATTTTGTGAGTGGAACCAAGCTCGCTGATTGTTTGCGAAATACAAACAACCCGGCCTTCACTGTTTTATCTAACTGGTTGTCGAGGATGCAGATCGCGACGGACGTAGCCCACGGACTCGATTATATTCACAACAGAACAGGCTTAAAGGCGAGATTTTCCCATAATCACATCAATAGCAGTGCTATCATCGTCACGGAACCTTCCTTCAACGCCAAGATATGTCACTTCGGCACCGCCCAGCTGTGCGGTGAAATCCAAGAGGGAGAAGAAATCGTCGAGCAGTCTTACTTTTCCCGGTCGCCTACGAGATCGATAGAATTGAAAAAATGGGGCAGTTTGCGAGCTAAAATCGAGGGAGTGAGAGGATACATGTCGCCGGAATATCAAACTACAGGGGTGGCGAACGAGAAGTCCGATGTGTACGCATTCGGGGTAATGATGCTGGAACTCCTATCAGGAGAGGAGCCACTGAGTTATAAGTTCGATAAGAAAAGGGGCGCTTTGATGAGGTCGTCGGTGATCGAGACGGCGAGGGCTGCCGTCCACGGTGATTGTGAGGGCGGCGGGGGTACAAGGAAGTGGTTGGATTGGAGGCTGAAGGACTCATTTCCTATAGAGGTTGCAGAGGAGGCGACACGTGTAGCTTTGGACTGCGTCGACGTGGATCCAGCGAAGCGGCCTGATATGATCCACGTCGCTGGAAAGATTTCGAAGCTTTATTTAGATTCCAAAATTTGGTCTGACAGTATCAAGTTGCCCTCTGACATTTCAGTTTCCCTGGCTCCACGATGA 1299 0.5058 MCKTKKAINAASPTSTPRSYKSHPNPKSPRPTTSSPTISSISFRPSDQHTTSISDMLAPHAPVSSPRSFASATLRDTLPENPHVYPFSEICSATNNFTDKYCYSSSSTPSWRCTLRGRDVIVYQHKFRRQIGTTQHQQRLSLICRSHHVSIIKLLGASISDHHIHLVYDFVSGTKLADCLRNTNNPAFTVLSNWLSRMQIATDVAHGLDYIHNRTGLKARFSHNHINSSAIIVTEPSFNAKICHFGTAQLCGEIQEGEEIVEQSYFSRSPTRSIELKKWGSLRAKIEGVRGYMSPEYQTTGVANEKSDVYAFGVMMLELLSGEEPLSYKFDKKRGALMRSSVIETARAAVHGDCEGGGGTRKWLDWRLKDSFPIEVAEEATRVALDCVDVDPAKRPDMIHVAGKISKLYLDSKIWSDSIKLPSDISVSLAPR 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4401g00005 432 MobiDBLite consensus disorder prediction 8 52 - -
Pral4401g00005 432 MobiDBLite consensus disorder prediction 1 52 - -
Pral4401g00005 432 ProSiteProfiles Protein kinase domain profile. 76 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4401g00005 432 SUPERFAMILY Protein kinase-like (PK-like) 111 403 IPR011009 -
Pral4401g00005 432 Gene3D Phosphorylase Kinase; domain 1 66 170 - -
Pral4401g00005 432 Gene3D Transferase(Phosphotransferase) domain 1 172 419 - -
Pral4401g00005 432 Pfam Protein kinase domain 134 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4401g00005 432 PANTHER OS09G0572100 PROTEIN 1 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4401g00005 Pral-Chr4401 14111 15686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4401g00005 80 425 Receptor kinase-like Gene Family AT1G51940 29.167 1.60e-37 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4401g00005 Pkinase 6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4401g00005 - - cave:132164263 481.485