Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4400g00028 | ATGGGAAAGGCTTCTCTGGTCTTCGTTGCATTTCTTATCTCCTTCGCCTTAACGGTCGATGTTAGAATCACGGGGGTTTACCCTGGGGATCCTTGGCTGCAGAGTGCTCATGCTCCCTTCTGTGGAGGCACTGATGCCTCTGGCACTATGGGTGGAGCTTGCGAACACGGTGACATATACAGCCACGGGTATGGCGGCAACACGGAGGCGCTGAGCACGGCACTATTCGACTTTGGGCTGGGCTGCGGCTCGTGCTACGAGGTAAAGTGCGCAAATGACTCGCAACGGTGTTACTCTTGGAGCCTCTCCATATTCGTCGCGGCCACTAACTTCCGCTATGCTCTTCGGAACCACAGTAGCCGCAAGGCACCCTCAGCTGAAACAGGCGTTAAAACTGGCACTCAAACGCAGTATTGGTGGGGACAGTCATGGTCGTTTACGGTGACGGGCAATGACGGACGCACGTCCACCTCTTGCAACATCGTGCACTGGCAATTCAGTCAAACTTTCACTGCCCGGATCTTCGAGGTTTGA | 534 | 0.5487 | MGKASLVFVAFLISFALTVDVRITGVYPGDPWLQSAHAPFCGGTDASGTMGGACEHGDIYSHGYGGNTEALSTALFDFGLGCGSCYEVKCANDSQRCYSWSLSIFVAATNFRYALRNHSSRKAPSAETGVKTGTQTQYWWGQSWSFTVTGNDGRTSTSCNIVHWQFSQTFTARIFEV | 177 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4400g00028 | 177 | PANTHER | EXPANSIN-A15 | 12 | 111 | IPR002963 | GO:0009664 | |
Pral4400g00028 | 177 | SMART | dpbb_1 | 68 | 138 | IPR007112 | - | |
Pral4400g00028 | 177 | PRINTS | Expansin/Lol pI family signature | 50 | 68 | IPR007118 | GO:0005576 | |
Pral4400g00028 | 177 | PRINTS | Expansin/Lol pI family signature | 72 | 90 | IPR007118 | GO:0005576 | |
Pral4400g00028 | 177 | PRINTS | Expansin/Lol pI family signature | 32 | 47 | IPR007118 | GO:0005576 | |
Pral4400g00028 | 177 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 51 | 177 | IPR007112 | - | |
Pral4400g00028 | 177 | Gene3D | - | 24 | 176 | IPR036908 | - | |
Pral4400g00028 | 177 | PRINTS | Expansin signature | 63 | 77 | IPR002963 | GO:0009664 | |
Pral4400g00028 | 177 | PRINTS | Expansin signature | 104 | 114 | IPR002963 | GO:0009664 | |
Pral4400g00028 | 177 | PRINTS | Expansin signature | 90 | 101 | IPR002963 | GO:0009664 | |
Pral4400g00028 | 177 | SUPERFAMILY | Barwin-like endoglucanases | 26 | 113 | IPR036908 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4400g00028 | Pral-Chr4400 | 115474 | 116096 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4400g00028 | 3 | 177 | Expansin Gene Family | AT2G39700 | 36.047 | 9.04e-38 | 129 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4400g00028 | - | - | nnu:104597175 | 147.132 |