Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4400g00005 ATGGCTGAGATTGAGGGATTTCCAGGAAGCTCCATGCATGGAGTCACTGGCAGAGAGCAAACCTTCGTATCGTCTGTTGCTTCCCCAATGGTCCCTTCTGACCACACTGCCAACTTCGATCTCCCAGTTGATTCTGAGCACAAAGCTAAAGTCTTCAAACTCTTCTCTTTTGCCAATCCCCACATGAGAACCTTCCACCTCTCCTGGATTTCCTTCTTCACTTGCTTCGTCTCAACCTTCGCGGCAGCCCCTCTGGTTCCCATAATCCGTGACAACCTTAACCTCACCAAATACGACATTGGGAATGCGGGAGTCGCCTCTGTCTCTGGCAGCATCTTCTCTAGGCTTATGATGGGTGCAGTCTGTGACCTGTTAGGCCCCCGTTATGGCTGTGCCTTTCTCATAATGCTCACAGCGCCAACCGTGTTCTGCATGTCGTTCGTGAATGATGCTGGAGGTTACATAGCGATGAGGTTCTTGATAGGGTTTTCGCTGGCCACTTTTGTGTCGTGTCAGTACTGGATGAGTACTATGTTTAACAGTAAGATAGTAGGGCTTGCGAACGGGACAGCAGCGGGGTGGGGCAACATGGGAGGTGGGGCCACCCAGCTTATAATGCCACTGGTGTATGAATTGATCAAAAGAGCAGGATCTACTCCTTTTGTTGCCTGGAGAATTGCCTTTTTCGTCCCTGCTTGGATGCATGTCATCATGGGGATCCTCGTCTTGACCCTCGGCCAAGACCTGCCTGATGGCAACCTTGGTGCTTTGCAAAAGAAGGGTGATGTCAATAAGGACAAGTTCTCCAAGGTGCTGTGGTATGCGATAACGAATTACAGGACATGGATTTTTGCTCTGCTGTACGGGTACTCCATGGGAGTTGAATTGACCACTGATAATGTCATTGCCGAATATTTCTATGATAGGTTCAATCTGAAGCTGCACACCGCTGGAATCATTGCTGCTACATTCGGAATGGCTAACTTTGTTGCTCGTCCTTTTGGCGGGTACGCTTCCGATCTCGCTGCTCGATTATTTGGGATGAGAGGCAGGCTTTGGACCCTCTGGATTCTTCAAACCCTAGGAGGTGTTTTCTGCATATGGCTTGGACGGGCCAATTCTCTTCCCCTTGCTGTCGTGGCCATGATTCTATTCTCCATCGGAGCTCAAGCTGCTTGCGGCGCAACTTTTGGCATCATCCCTTTCATCTCGAGGCGCTCTCTGGGCATTATCTCGGGCTTAACCGGGGCAGGTGGAAACTTCGGGTCGGGGCTAACCCAGTTGATCTTCTTCTCAACCTCAAAAATGTCGACCTCAACGGGTCTGTCCTGGATGGGTGTTATGATAGTGGCCTGCACACTTCCGGTGAGTGTCGTTCACTTCCCTCAGTGGGGCGGCATGTTCCTTCCTCCTTCTAAAGATGTTAACAAGTCCACAGAAGAACACTATTACGCATCTGAATGGAACCAAGAGGAGAGAGAGAAGGGCTTACACCAACAGAGTCTCAAGTTCGCAGAGAACAGTCGTTCTGAGAGAGGCAAGCGTGTTGCCTCTGCTCCAACGCCACCTAACACGACTCCCACTCACCAAGTTTAA 1596 0.5038 MAEIEGFPGSSMHGVTGREQTFVSSVASPMVPSDHTANFDLPVDSEHKAKVFKLFSFANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKYDIGNAGVASVSGSIFSRLMMGAVCDLLGPRYGCAFLIMLTAPTVFCMSFVNDAGGYIAMRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRAGSTPFVAWRIAFFVPAWMHVIMGILVLTLGQDLPDGNLGALQKKGDVNKDKFSKVLWYAITNYRTWIFALLYGYSMGVELTTDNVIAEYFYDRFNLKLHTAGIIAATFGMANFVARPFGGYASDLAARLFGMRGRLWTLWILQTLGGVFCIWLGRANSLPLAVVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSKMSTSTGLSWMGVMIVACTLPVSVVHFPQWGGMFLPPSKDVNKSTEEHYYASEWNQEEREKGLHQQSLKFAENSRSERGKRVASAPTPPNTTPTHQV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4400g00005 531 FunFam High affinity nitrate transporter 57 254 - -
Pral4400g00005 531 FunFam Nitrate transporter 2.1 265 466 - -
Pral4400g00005 531 CDD MFS_NRT2_like 65 456 IPR044772 GO:0015112
Pral4400g00005 531 Gene3D MFS general substrate transporter like domains 57 253 IPR036259 -
Pral4400g00005 531 MobiDBLite consensus disorder prediction 489 513 - -
Pral4400g00005 531 Gene3D MFS general substrate transporter like domains 264 464 IPR036259 -
Pral4400g00005 531 SUPERFAMILY MFS general substrate transporter 58 458 IPR036259 -
Pral4400g00005 531 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 1 516 IPR044772 GO:0015112
Pral4400g00005 531 MobiDBLite consensus disorder prediction 489 531 - -
Pral4400g00005 531 Pfam Major Facilitator Superfamily 69 425 IPR011701 GO:0022857|GO:0055085
Pral4400g00005 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 64 458 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4400g00005 Pral-Chr4400 35337 37575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4400g00005 1 529 Inorganic Solute Cotransporters AT5G60770 79.962 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4400g00005 K02575 - gmx:547946 967.222