Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4400g00003 ATGGCCAAACTCAGAAATAGCAGCGGTAAAAAGAAAGGTGGGATCGTGAAGCTGAAAGTTGTGGTTGAGAAGATCCAAAAGAAGCTGTTACCGGGTATGAAAGGGAGTTCATATCGAGACGCATGCGAAGAAGAAGAAGGAAGTGAGTCGAGTTATGTCCCAGAAGATGTGAAAGAAGGACATTTTGCGGTGATTGCTGAGGACGGAGAGGAGCCAAGGAGATTTGTTGTGCCACTAAGCTGCTTAACGCACCCATCTTTTTTGAGGCTATTGGAGGAAGCAGCTGAGGAGTATGGGTTTGATCATGAAGGAGCTCTAACAATCCCTTGCAGTCCGAGAGAGCTTGAAAGGATATTGGAGGGACGCTCTGAAAGTGATGCGGTCAGCTGGAATGTCTGTAAACCCATGGTTCAAACCTACTCCTAA 426 0.4671 MAKLRNSSGKKKGGIVKLKVVVEKIQKKLLPGMKGSSYRDACEEEEGSESSYVPEDVKEGHFAVIAEDGEEPRRFVVPLSCLTHPSFLRLLEEAAEEYGFDHEGALTIPCSPRELERILEGRSESDAVSWNVCKPMVQTYS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4400g00003 141 MobiDBLite consensus disorder prediction 38 53 - -
Pral4400g00003 141 Pfam Auxin responsive protein 44 120 IPR003676 GO:0009733
Pral4400g00003 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 118 IPR003676 GO:0009733
Pral4400g00003 141 MobiDBLite consensus disorder prediction 33 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4400g00003 Pral-Chr4400 18130 18651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4400g00003 13 110 Calmodulin-binding Proteins AT5G20810 41.837 1.14e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4400g00003 K14488 - vvi:100267173 164.081