Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4397g00011 ATGGGTCAGATCCAGTACTCTGAGAAATACTTCGATGATACTTACGAGTACAGGCATGTGGTCCTGCCTCCTGAAGTGGCCAAATTGCTTCCCAAGAATCGGCTTCTCTCCGAAAATGAGTGGCGTGCAATTGGGGTTCAACAGAGCCGCGGTTGGGTTCACTATGCAATTCATCGTCCTGAGCCACACATAATGCTTTTCAGGAGGCCCCTGAACTATCAGCAGCAGCAGGAAAATCAGGCCCAGCAAAACATGGTTGCCGCCAAGTGA 270 0.5037 MGQIQYSEKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQNMVAAK 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4397g00011 89 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Pral4397g00011 89 Gene3D - 1 84 IPR036858 GO:0016538
Pral4397g00011 89 SMART CKS_2 3 72 IPR000789 GO:0016538
Pral4397g00011 89 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 86 - -
Pral4397g00011 89 Coils Coil 71 89 - -
Pral4397g00011 89 FunFam Cyclin-dependent kinases regulatory subunit 1 84 - -
Pral4397g00011 89 SUPERFAMILY Cell cycle regulatory proteins 1 82 IPR036858 GO:0016538
Pral4397g00011 89 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Pral4397g00011 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Pral4397g00011 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Pral4397g00011 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Pral4397g00011 89 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4397g00011 Pral-Chr4397 70028 71495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4397g00011 1 82 Core Cell Cycle Gene Families AT2G27970 91.463 8.33e-53 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4397g00011 K02219 - zju:107410685 174.481