Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00060 ATGGCGGAGGACCGCAACGGCGATAAGAATGAAAACAGTGATTACAGTTCAGAGGACGAAGGAACTGAGGATTACAGGCGAGGAGGTTACCATGCCGTTCGAATTGGGGATACTTTCAATAATGGGTTCTATGTGGTGCAGGCCAAGCTTGGTTGGGGTCATTTTTCTACTGTCTGGCTTGCTTGGGACGTCCAGAGATCGCGTTATGTGGCCTTGAAAATTCAAAAGAGTGCTCAGCATTATACTGAAGCTGCCATGGATGAAATAAAGATTCTTAAACAGATTGCAGAAGGGGACCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTCAAGCATTCTGGTCCTAATGGTCAGCATGTATGTATGGTATTTGAATTTCTGGGTGACAATCTTCTGACACTTATCAAGTATAGTGATTACAGAGGGGTTCCTCTCCCCATGGTTAAAGAAATTTGCTACCATATTTTGGTGGGCCTGGATTACTTGCATCGAGAGCTTTCCATAATACATACAGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTATGATAGATCCGTCTAAGGATCACAGAAAGTCAGGTGCCGGACTCATTCTTCCTAGCACCAAGGACAATTCTGTATCCAGGAATGAGGTCACAAAAGATAATGTTAATTTGAATGGAAATCTGAGCAAAAACCAAAAGAAGAAAATGCATAGAACGGCTAAGGTTGATAATGAAATTATTGAGGGGGCAGGGGGTTCTAAAGATCATGATCAAGAAGATTCTAGCAATGATCTAAAATCGAACTCTGAATCTGTTGAAGATAAATCCAGTAGTTCAGTGGGTAAAGATGAACCAACAAAGATTGTCGAAACTAAGGATGTTCCGCAGGGAAGTCAGAGTCAGAGGAAAATCAGCCGTTCCATGAGAAAAAAGTTGCTTGCAGCTGTTGATCTAAAGTGCAAACTGGTTGATTTTGGAAATGCTTGTTGGACTTATAAGCAATTCACAAATGATATTCAAACGAGGCAGTATAGATGTCCTGAGGTTATTCTTGGATCTAAATACTCAACGCCAGCGGATTTATGGTCTTTTGCTTGCATTTGCTTTGAGCTGGCCACTGGTGATGTTCTTTTTGATCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAACTTCTTGGAATGATGCCTCGCAAGATTGCACTAGGGGGCCGCTATTCCCGGGAATTTTTCAATAGATATGGTGATCTAAGGCACATTCGTCGGTTGCGGTTCTGGCCTCTTAATAAGGTGCTTACAGAGAAGTATAATTTCAGTGAGCAAGACGCAAAAGACATGACAAACTTCCTCGTTCCCATACTTGATTTCGTCCCCGAAAATCGGCCAACAGCTGCTCAGTGTCTTAGTCATACCTGGTTCAGTGCTGGTCCTCGGATTCTTCAGCCCTGTTCAACTACCGTGCAACCTGAGGCCATTGAGGAGGGAATGTCTGAAGAAACAAAGCGGGATAAGGCTGAGCAGGAAGCTGTGGAAGTTGGTGTGGGCAATATAGCCATTGATGGCACTCCAAAGCCACTCAAGAAGTCCCAGTCTGTCAAGTGA 1617 0.4335 MAEDRNGDKNENSDYSSEDEGTEDYRRGGYHAVRIGDTFNNGFYVVQAKLGWGHFSTVWLAWDVQRSRYVALKIQKSAQHYTEAAMDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLPMVKEICYHILVGLDYLHRELSIIHTDLKPENVLLLSMIDPSKDHRKSGAGLILPSTKDNSVSRNEVTKDNVNLNGNLSKNQKKKMHRTAKVDNEIIEGAGGSKDHDQEDSSNDLKSNSESVEDKSSSSVGKDEPTKIVETKDVPQGSQSQRKISRSMRKKLLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSREFFNRYGDLRHIRRLRFWPLNKVLTEKYNFSEQDAKDMTNFLVPILDFVPENRPTAAQCLSHTWFSAGPRILQPCSTTVQPEAIEEGMSEETKRDKAEQEAVEVGVGNIAIDGTPKPLKKSQSVK 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00060 538 MobiDBLite consensus disorder prediction 236 288 - -
Pral4396g00060 538 MobiDBLite consensus disorder prediction 202 228 - -
Pral4396g00060 538 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 502 - -
Pral4396g00060 538 CDD STKc_SRPK 33 478 - -
Pral4396g00060 538 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Pral4396g00060 538 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Pral4396g00060 538 ProSiteProfiles Protein kinase domain profile. 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00060 538 MobiDBLite consensus disorder prediction 1 23 - -
Pral4396g00060 538 Pfam Protein kinase domain 315 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00060 538 Pfam Protein kinase domain 44 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00060 538 Gene3D Phosphorylase Kinase; domain 1 20 126 - -
Pral4396g00060 538 FunFam CMGC/SRPK protein kinase 30 129 - -
Pral4396g00060 538 MobiDBLite consensus disorder prediction 193 303 - -
Pral4396g00060 538 FunFam Serine/threonine-protein kinase SRPK-like protein 308 478 - -
Pral4396g00060 538 Gene3D Transferase(Phosphotransferase) domain 1 127 479 - -
Pral4396g00060 538 SMART serkin_6 44 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00060 538 SUPERFAMILY Protein kinase-like (PK-like) 39 488 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00060 Pral-Chr4396 372772 376022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00060 1 529 EF-hand Containing Proteins AT5G22840 66.667 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pral4396g00060 Pkinase 9.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00060 K08832 - gmx:100791829 861.677