Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00058 ATGGCTTTCACTTGGTCCCGCCTGCTTCTTTCTCGCTCTTCACCTTCCACCTACTCCATCTTCTCCGATCTTACCCTAGCTCGCTCTGGTGACATGCTATGTCCCACATCTTCTTCTTTAGTCCACCGAAGCAGCATCTCCCTTGAGCTTCCATTTACCCTCACAACCAGGCTTTTGAGGTCCAGACTCCAAGTCCAATGCTCCGCCAAATCCACGGGGGAGGAGCAGCGAACTTCGGGAGAAACTGTCTTGTCTTATTCCAGCGAAGCCAGACATCACGAGACAAATGAGGCACAGAGATCGGTCTCCACCTCGTCAGGAGATTCTTTCTCTCTTGGAATTCGAGAACCAGTTTATGAGGTTTTGGAGGTGAAGTCTAATGGAACGGTATCAACCAGAACAATCAACAGAAGACAGCTGTTGAAGTCAAGTGGTCTTCGTCCACGAGATGTTCGAAGTGTGGATCCTTTACTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGCATGCTATTCTTCTAAATTTGGGTTCATTACGAGCAATAGCAATGCAGGAGCGTGTGCTTATATTTAACTACAACTGCAGTAAAGGAGGGAAAGCTTTTTTAGAGTCATTACTGCCTCGGTTAAACCCTAAGAACAACAATGGAGGACCATCCATGCCATTTGAGCTCGAGGTTGTTGAAGCAGCACTTCTTTCAAGAATACAGCATTTAGAACAGAAACTGATGCACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGTCTTGCCGAACCGACTAGCTGGCAATATATTGGAGGAACTTCGTATCAGCAAACAAACATTGGTTGAGTTAGGTTCGAGGGCAGGAGCTCTCAGACAAATGCTTCTTGACCTCCTGGAGGACCCTCTTGAAATACAGCGTATATGTATTATGGGCAAAAACTGCATGCTTAAGAAAGGACACGACAATGTGGAATGCTCAGTAGCCTCAGAAAAGCAGATTGCTGAGGAGGAAGAGGAGGAAATCGAGATGCTTTTGGAAAATTACCTTCAAAGATGTGAATCTTGCCATGGCCAAGCTGAAAGGCTTCTGGATTCCGCCAGAGAAATGGAAGATTCTATATCTGTCAGTCTAAGCTCAAGGAGGCTTGAGGTTAGCCGAGTGGAACTACTTCTTCAGGTTGGAGCATTCTGTTTGGCAGTTGGTGCCCTTATAACAGGTATTTTTGGCATGAATCTGAAGTCCTATCTTGAAGAACGTGTGTATGCATTTTGGCTTACAACAGCTGGGATTATAGTTGGCGCGGTTGTAGCCTTCTTTCTTATGTATTCGTATCTCAAGGCAAGGAAAATATTTTGA 1350 0.4526 MAFTWSRLLLSRSSPSTYSIFSDLTLARSGDMLCPTSSSLVHRSSISLELPFTLTTRLLRSRLQVQCSAKSTGEEQRTSGETVLSYSSEARHHETNEAQRSVSTSSGDSFSLGIREPVYEVLEVKSNGTVSTRTINRRQLLKSSGLRPRDVRSVDPLLFLTNSMPSLLVREHAILLNLGSLRAIAMQERVLIFNYNCSKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQHLEQKLMHLEPRVQALLEVLPNRLAGNILEELRISKQTLVELGSRAGALRQMLLDLLEDPLEIQRICIMGKNCMLKKGHDNVECSVASEKQIAEEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSISVSLSSRRLEVSRVELLLQVGAFCLAVGALITGIFGMNLKSYLEERVYAFWLTTAGIIVGAVVAFFLMYSYLKARKIF 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00058 449 Gene3D Magnesium transport protein CorA, transmembrane region 196 380 - -
Pral4396g00058 449 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 385 440 IPR045863 -
Pral4396g00058 449 CDD Mrs2_Mfm1p-like 121 448 IPR039204 -
Pral4396g00058 449 FunFam Magnesium transporter MRS2-11, chloroplastic 114 195 - -
Pral4396g00058 449 Pfam CorA-like Mg2+ transporter protein 231 439 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Pral4396g00058 449 Gene3D Magnesium transport protein CorA, transmembrane region 389 447 - -
Pral4396g00058 449 FunFam Magnesium transporter MRS2-11, chloroplastic 198 380 - -
Pral4396g00058 449 MobiDBLite consensus disorder prediction 69 109 - -
Pral4396g00058 449 Gene3D - 114 195 - -
Pral4396g00058 449 MobiDBLite consensus disorder prediction 69 86 - -
Pral4396g00058 449 Coils Coil 325 349 - -
Pral4396g00058 449 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 99 448 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00058 Pral-Chr4396 367451 372665 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00058 112 449 MRS2 Gene Family AT5G22830 80.769 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00058 K16075 - qsa:O6P43_000409 582.408