Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00035 ATGGAGACATGGATCGAGGATCTAGCCGACGACCTCCAGAGCCTAAGCTTCGCCTCCACCACCACCGCCACCGATATCAAACGAAGCACAAGCTCCGGCTCAGAATCAACAACCTTAACTGACTCAACCTCTGCCCGCCTGGCTTCACTCCCACTCGTTACCACTACTAAACCCCACGCACCTTCGTCGGACCCTTGTTGGGCTGCCATCCACAGAATCCGATCGGAGTCCCCGAGCCAGCGCATAGCCCCCTCAGACCTCCGGTTCAGCCACCGGCTGGGCTCCGGCGACATAGGCTCCGTCTACCTCACGGAGCTCAAATACACCAGCAATGGCAAGGAGGGTTGCGTGCTATTCGCGGCTAAAGTGATGGACAAGAAAGAGCTCGCGAGTCGGAGCAAGGAAGGGAGGGCGAGGACAGAAAAGGAAATTCTCGAATTGCTGGACCACCCGTTTCTTCCCACTCTCTACGAGACCATAGACGCGCCCAGATGGATCTGCCTCTTGACCGAGTTCTGCCCCGGCGGTGATTTGCACGTGCTCCGACAACGACAGCCCAACAAGCGCTTCCATGAACCCGCCGTCAGGTTTTATGCGTCAGAAGTGGTGGTGGCTCTAGAATACCTTCATATGCTGGGGATAGTGTATCGTGATCTCAAGCCCGAGAACGTGTTAGTTCGATCGGACGGCCATATCATGCTCACTGACTTTGACCTGTCGTTAAAAGGCGATGATTCCTCATCAACGGCTCAGATCATTTCTGAACAAAACCCGGCTCCCTCGGTCCCACAGAATAAGGATTACCACGTTGATCCCCCTCCTTTTGCCTCCTCTTCCTGCATACTTCCCAACTGCATAGTTCCCGCTGTATCGTGCTTTCACCCAAAACGAAAGCGCAAGAAGAAGCAGAGCCTGCGTAACGGTCCTGAGTTTGTGGCCGAGCCTATTGATGTGCGGTCCATGTCATTCGTTGGGACCCACGAGTACTTGGCGCCGGAGATAGTGTCCGGCGAGGGACACGGTAGTGCGGTGGACTGGTGGACGTTGGGCATATTTATATTTGAACTGTTTTACGGTGTGACGCCGTTTAGGGGACCGGACAATGAGCTAACCCTAGCTAACATCGTGGCTCGAGCCCTCGAGTTCCCAAAAGAACCAGCCGTGCCGGCCACGGCGAAGGATCTTATCTCGCAGTTATTGGTGAAGGACCCGACGAGGCGGTTAGGTTCAAAGATGGGTTCGTCGGCGATAAAACACCATCCCTTTTTTCAAGGCGTGAACTGGGCATTGTTGAGGTGTACCCCTCCACCCTATGTGCCCCCACCTTATACTAAAGAAGCTGTATCTGACGAAAGCTGTCCCGAGACTCCTATTGATTATTACTGA 1386 0.544 METWIEDLADDLQSLSFASTTTATDIKRSTSSGSESTTLTDSTSARLASLPLVTTTKPHAPSSDPCWAAIHRIRSESPSQRIAPSDLRFSHRLGSGDIGSVYLTELKYTSNGKEGCVLFAAKVMDKKELASRSKEGRARTEKEILELLDHPFLPTLYETIDAPRWICLLTEFCPGGDLHVLRQRQPNKRFHEPAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKGDDSSSTAQIISEQNPAPSVPQNKDYHVDPPPFASSSCILPNCIVPAVSCFHPKRKRKKKQSLRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGPDNELTLANIVARALEFPKEPAVPATAKDLISQLLVKDPTRRLGSKMGSSAIKHHPFFQGVNWALLRCTPPPYVPPPYTKEAVSDESCPETPIDYY 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00035 461 SMART serkin_6 87 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00035 461 Gene3D Transferase(Phosphotransferase) domain 1 177 268 - -
Pral4396g00035 461 Gene3D Transferase(Phosphotransferase) domain 1 319 441 - -
Pral4396g00035 461 Pfam Protein kinase domain 90 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00035 461 Pfam Protein kinase domain 320 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00035 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Pral4396g00035 461 PANTHER FLIPPASE KINASE 1-RELATED 27 445 - -
Pral4396g00035 461 FunFam serine/threonine-protein kinase D6PK-like 318 441 - -
Pral4396g00035 461 SUPERFAMILY Protein kinase-like (PK-like) 67 449 IPR011009 -
Pral4396g00035 461 ProSiteProfiles Protein kinase domain profile. 87 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4396g00035 461 MobiDBLite consensus disorder prediction 23 42 - -
Pral4396g00035 461 Gene3D Phosphorylase Kinase; domain 1 86 176 - -
Pral4396g00035 461 FunFam serine/threonine-protein kinase D6PK-like 177 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00035 Pral-Chr4396 206858 211948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00035 1 461 AGC Kinase Gene Family AT3G44610 66.098 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pral4396g00035 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00035 K08286 - cave:132163612 723.391