Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00034 ATGAAGGTGATCGCTGCGTATTTGCTGGCTGTATTGGGAGGGAACGCGGCCCCTACCACCGACGACGTGAAGCACATCCTGGGCTCAGTTGGTGCTGAGATTGATGATGAAAGGATTGAGTTGCTTTTGTCTGAAGTCAGTGGTAAAGACATCACTGAGCTAATTGCTAGTGGAAGAGAGAAGTTGGCTTCAGTACCTGGAGGTGGTGGCGCAGTTGCTGCTGCTGCTGCACCTGCTGCTGGAGGTGCTGCTGGTGGTGCTGCACCTGCTGCCGAGGCAAAGGAAGAAAAGGTGGAAGAGAAGGAGGAGTCTGATGATGACATGGGCTTTAGTTTATTCGACTGA 345 0.5246 MKVIAAYLLAVLGGNAAPTTDDVKHILGSVGAEIDDERIELLLSEVSGKDITELIASGREKLASVPGGGGAVAAAAAPAAGGAAGGAAPAAEAKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00034 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Pral4396g00034 114 MobiDBLite consensus disorder prediction 99 114 - -
Pral4396g00034 114 Pfam 60s Acidic ribosomal protein 18 113 - -
Pral4396g00034 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral4396g00034 114 FunFam 60S acidic ribosomal protein P2 1 59 - -
Pral4396g00034 114 Gene3D - 1 59 IPR038716 -
Pral4396g00034 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Pral4396g00034 114 MobiDBLite consensus disorder prediction 81 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00034 Pral-Chr4396 203486 205388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00034 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 69.298 5.14e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00034 K02943 - dcr:108203357 133.265