Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00015 ATGCTAGTTTCCGAGACAGAAACGGTCGCTTCCGACAAGAGCCATACACAACAGTTGGCGCCTTCGTCCCTATCCCTGCCTCTTCCGCAATTGCAGCATGAATCGCCGTCAAAAGAAGCCTCAATTTCTTCACCAAACAGTCATCAACATTCAATACTCTCTCTTACCCTTGAAGAAATCCAAATCAAGAGCGGAAGGATGTTCGGGTCAATGAGCATGGACGAATTCCTAGCCAATATTTGGAATTCCGACGGTAACCAGGTCGATTCACAACCGCCGCCGCTCGCCCGTGAAGAATTGCCTGTTCAAAGCAAAAACGCAGGTGCAGAAACAGCACCCGTTATCTCCCAACAACCCTCATTGTCTGTTCCTCCTCCGATTTGCAAGAAAACTGTGGATGAGGTTTGGTCTGAGATCCGCAAAGATCACCAGCCACAGCCAAATGAAGAAGCTAATGACGAAATTAGCGGCAATGAGAGCCTCAAAAGGCAACAAACACTTGGGGAAATGACTCTGGAGGATTTCCTGATAAAAGCTGGGGTAGTACAAGAATCATCTTTACAGTCATTCATACCCTTGAAGACTTCTGGGCCTCAACAACCATCATCATCGTTGCCATTTCAGATCCAAATTGGGAATATGACAGATAATAGACCATTCGATGCGCGTTATAAAATGGGGCCTGCAGTGAGGATGGGATTTTCTCCCCAACAGAATGTCGGAGGCTGTTCGTCGGGAAATGGAACTGCAACGCGCCGAGTGTTGTCCCAGAGCCATAGCTTAGCAGGAAAAGACCCCGCCAATGGTGGTGCTGCTCAGAAATTTCAAACATCAAGAGAGTCTGCTAGGAACAGTGGCAAGAGGAGGATAATTGATGGCCCTCCTGAAGTGGTGGTGGAGAGACGGCAGCGCAGGATGTTGAAGAATCGCGAATCAGCAGCGCGTTCTCGAGCAAGAAGACAGGCATATACGGTGGAGCTAGAAGCAGGTCTGAGTCAACTTAGACAAGAAAATGAAAAGCTGAAAGAAATTCTGGCTGAAGCTGAGCGGAAGAGAAGACAAGAGATAGCGCGGAAGAACCACACAACCAGGGCTCAGAAAAGAGCAGAGAAGTTTAGGGCTATGAGGAGGACAGTGAGCGCGGCCTGGTGA 1152 0.487 MLVSETETVASDKSHTQQLAPSSLSLPLPQLQHESPSKEASISSPNSHQHSILSLTLEEIQIKSGRMFGSMSMDEFLANIWNSDGNQVDSQPPPLAREELPVQSKNAGAETAPVISQQPSLSVPPPICKKTVDEVWSEIRKDHQPQPNEEANDEISGNESLKRQQTLGEMTLEDFLIKAGVVQESSLQSFIPLKTSGPQQPSSSLPFQIQIGNMTDNRPFDARYKMGPAVRMGFSPQQNVGGCSSGNGTATRRVLSQSHSLAGKDPANGGAAQKFQTSRESARNSGKRRIIDGPPEVVVERRQRRMLKNRESAARSRARRQAYTVELEAGLSQLRQENEKLKEILAEAERKRRQEIARKNHTTRAQKRAEKFRAMRRTVSAAW 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00015 383 MobiDBLite consensus disorder prediction 140 159 - -
Pral4396g00015 383 MobiDBLite consensus disorder prediction 1 49 - -
Pral4396g00015 383 Gene3D - 299 355 - -
Pral4396g00015 383 MobiDBLite consensus disorder prediction 260 290 - -
Pral4396g00015 383 SMART brlzneu 297 361 IPR004827 GO:0003700|GO:0006355
Pral4396g00015 383 Coils Coil 324 358 - -
Pral4396g00015 383 Pfam bZIP transcription factor 301 351 IPR004827 GO:0003700|GO:0006355
Pral4396g00015 383 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 48 382 IPR043452 GO:0003700|GO:0045893
Pral4396g00015 383 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Pral4396g00015 383 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 351 IPR004827 GO:0003700|GO:0006355
Pral4396g00015 383 SUPERFAMILY Leucine zipper domain 301 346 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00015 Pral-Chr4396 82177 86598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00015 45 383 bZIP Transcription Factor Family AT3G44460 43.804 9.97e-70 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4396g00015 bZIP_1 1.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00015 K14432 - gmx:100799576 310.457