Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00013 ATGACTTCTTTCTGGGAAAAAGCAAGAGAATGGTCTGATGAGCTTTGCATGGCGACCCACAGAATGGGTGAAACTGGTTTATCTGAGTCAGGACCTTCAACTTCAAGTCACCATGCTCCTTATGGGGTTCTTCATGGAATTAGTTCTCCTTCATCTAGCTTAATCAATCAAGGATCTAGTTATTATTTTGGAGGATTGGAAGAGGCAATTCTGCAAGGAGTGAAGATTAGGAACGAAGAAGCCAAAGCATCTTTATTCGCAGGCAAGCCTGCAGCTACACTAGAAATGTTCCCCTCATGGCCCATGAGATTCCAGCACACCCAAAGAGAAATACAGGGAGGTTCAAAATCCGGAGGAGAGAGCACCGATTCAGGATCAGGCCTGAATACTATTTCAAGCAAAACAGAAGCACAGTTTGAACCAGAATCTGAATCTCCCATAAGTAAAAAAGCTTCTTGCACAGATTATCAGGCTTTTGATCAGCAGCAGAAACAGCGGCTACAGCAACTAGAACAGGAGATGGCAAGCGATGCCTCAAGATGCCAAACACAGAATCAGAATGAATCGGCTGCTAAACCATTTCAGGCAAAGAGGAAAGGAGGCGGTTCTACATCAGACAGGCAACTCGATCCAAAGACAATGAGGCGTCTAGCTCAGAACAGAGAGGCTGCAAGGAAAAGCCGTCTCAGAAAGAAGGCTTACGTGCAGCAGCTAGAGTCAAGTAGAGTAAAGCTTTCCCAGCTCGAACAAGAGCTTCAAAGAGCACGCTCTCAGGGACTATTGATCGGCTGCGGTGGGACTTCTACTGCCAATAATATAAGTTCCGGTGCAGCAATATTTGACATAGAATATGGGAGATGGTTAGAAGAAGACCAGCGGCACATGGAGGAGCTGCGGCGGAGCTTGGAGGCGGCGGTGCCGGACAATGAACTTAGAGTGATGGTGGAGAGTTATCTGAGACACTACGACGAGGTCTTTGAGCTGAAGGGAGTCGCGGCAAAATCAGATGTGTTTCATGTCATGAACGGAATGTGGACCACCCCCGCTGAGCGTTGCTTCTTCTGGATTGCCGGCTTCCGGCCCTCCGATCTCATTGGGATGTTGGTACAGCAGTTAGAGCCAGTGACGGAGCAGCAGATAGTGGGGATGTATGGGCTGAGGCAGTCGACGCAGCAAGCGGAGGAAGCTCTGACCCAAGGACTCGACCAGCTCCAGCATTCTCTCCTCCACACCGTCGTCGGAGGCCTCACCGTCGACGGCGTTCACCAGATGTTTCTCGCTATGACCAAGCTTTCCGATCTCGAAGATTTTATCCGCCAGGCTGATAATCTAAGACAGCAAACACTTCACCAATTGTGTCGACTACTGACAGTTCGTCAAGCAGCAAAATGTTTTCTCGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCATCACGACCACGAGAGTCCCTGATCAACGACGAGACATGCCACCAAATAGCAACGAACATGCCCATAGTTCATCAGTCGTCCCAGAATCATTTCTCGACTTTCTGA 1554 0.4884 MTSFWEKAREWSDELCMATHRMGETGLSESGPSTSSHHAPYGVLHGISSPSSSLINQGSSYYFGGLEEAILQGVKIRNEEAKASLFAGKPAATLEMFPSWPMRFQHTQREIQGGSKSGGESTDSGSGLNTISSKTEAQFEPESESPISKKASCTDYQAFDQQQKQRLQQLEQEMASDASRCQTQNQNESAAKPFQAKRKGGGSTSDRQLDPKTMRRLAQNREAARKSRLRKKAYVQQLESSRVKLSQLEQELQRARSQGLLIGCGGTSTANNISSGAAIFDIEYGRWLEEDQRHMEELRRSLEAAVPDNELRVMVESYLRHYDEVFELKGVAAKSDVFHVMNGMWTTPAERCFFWIAGFRPSDLIGMLVQQLEPVTEQQIVGMYGLRQSTQQAEEALTQGLDQLQHSLLHTVVGGLTVDGVHQMFLAMTKLSDLEDFIRQADNLRQQTLHQLCRLLTVRQAAKCFLVIGEYYGRLRALSSLWASRPRESLINDETCHQIATNMPIVHQSSQNHFSTF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00013 517 SUPERFAMILY Leucine zipper domain 212 254 IPR046347 GO:0003700|GO:0006355
Pral4396g00013 517 MobiDBLite consensus disorder prediction 110 149 - -
Pral4396g00013 517 MobiDBLite consensus disorder prediction 164 192 - -
Pral4396g00013 517 PANTHER TRANSCRIPTION FACTOR TGA9 154 488 - -
Pral4396g00013 517 Coils Coil 167 187 - -
Pral4396g00013 517 ProSiteProfiles DOG1 domain profile. 277 485 IPR025422 GO:0006351|GO:0043565
Pral4396g00013 517 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 215 230 IPR004827 GO:0003700|GO:0006355
Pral4396g00013 517 MobiDBLite consensus disorder prediction 164 214 - -
Pral4396g00013 517 Pfam bZIP transcription factor 212 252 IPR004827 GO:0003700|GO:0006355
Pral4396g00013 517 CDD bZIP_HBP1b-like 212 263 - -
Pral4396g00013 517 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 210 254 IPR004827 GO:0003700|GO:0006355
Pral4396g00013 517 Coils Coil 231 258 - -
Pral4396g00013 517 Gene3D - 211 260 - -
Pral4396g00013 517 Pfam Seed dormancy control 294 369 IPR025422 GO:0006351|GO:0043565
Pral4396g00013 517 FunFam BZIP family transcription factor 211 260 - -
Pral4396g00013 517 SMART brlzneu 208 273 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4396g00013 Pral-Chr4396 64824 70773 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00013 167 517 bZIP Transcription Factor Family AT1G08320 63.636 4.70e-160 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4396g00013 DOG1 3.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00013 K14431 - gmx:100775461 678.707