Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4396g00007 ATGAAAGAGACCGAGAAGGTGGTGCCGGAGGCGGAGGAGCTGCCCAAGGCTATAGTGCGCCGGGTGGTGAAAGACGAGCTCTCACGGTGCTCCGACGGAGACATTTCCATTCACAAAGATGCCCTTCTCGCTTTCTCGGAAAGTGCGCGCATCTTTATCCACTACCTTTCCGCAACGGCCAACGACATTTGCAAGGAAGCAAGGAGGCAGATAATAAACGCCGATGATGTATTTAAAGCTCTTGAAGAGACGGAGTATTCCGAGTTTGTCCAACCCCTAAAGGCTTCTCTCGAAGAGTTTAGGAGGAAGAATGCGGGAAAGAAAGCGGGTGCGTCAAAGGAAAAGGAAGAGAAAAAGAAAAGGAAGTTAGAAGATGAGTCATCTGAGAAAGACGAGGGTGGTGACAACAAATGA 414 0.4952 MKETEKVVPEAEELPKAIVRRVVKDELSRCSDGDISIHKDALLAFSESARIFIHYLSATANDICKEARRQIINADDVFKALEETEYSEFVQPLKASLEEFRRKNAGKKAGASKEKEEKKKRKLEDESSEKDEGGDNK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4396g00007 137 Coils Coil 113 133 - -
Pral4396g00007 137 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 8 135 - -
Pral4396g00007 137 MobiDBLite consensus disorder prediction 101 137 - -
Pral4396g00007 137 Gene3D Histone, subunit A 4 137 IPR009072 GO:0046982
Pral4396g00007 137 FunFam DNA polymerase epsilon subunit 3 6 137 - -
Pral4396g00007 137 SUPERFAMILY Histone-fold 14 119 IPR009072 GO:0046982
Pral4396g00007 137 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 13 81 IPR003958 -
Pral4396g00007 137 Coils Coil 64 84 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4396g00007 14 101 CCAAT-HAP3 Transcription Factor Family AT5G47640 34.091 1.72e-11 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pral4396g00007 CBFD_NFYB_HMF 2.7e-09 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4396g00007 K02326 - qsa:O6P43_000470 161.384