Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4395g00012 ATGGAAAATCAGCCTCCTGGTTTTCGCTTCTACCCAACAGAGGAAGAACTAGTGGCTTTCTACCTCCATAACAAGCTTCAGGGGGGAAGCGACCACCTCAGCAGAGTCATCCCTGACATTGGCATTTATGACTTCGAGCCCTCCCAGCTTCCCAAGCTTGCGGGAGAGAGATGTCGTGCAGACACAGAGCAATGGTTCTTCTTCTCGCCGAGACAGGAGAGGGAAGCCAGAGGAGGCAGACCCAACAGGACCACGGCTTGTGGGTATTGGAAAGCCACAGGTTCTCCAGGGTACGTTTACTCTTCTGATAACAAAGTCATTGGGTTGAAGAAAACCATGGTTTATTACAGAGGCAAAGCTCCTTCCGGAAGGAAAACCAAGTGGAAGATGAACGAATACAGAGCTATTGAATTCTCTCACCAATCCTCTGTTCCTACTCCTAAGTTGAGGCACGAATTCAGCTTGTGCCGAGTTTACGTGGTATCGGGAAGCTTTCGAGCATTTGATCGTCGCCCTTTAGCTTGTTCAACATGTGGGCAGGATCAGGATATAAGGGTGGATGAATCAAGCTCGCGTGGAACCTCCCATCCACTCCCTGATGCAAACCCGAATGTAAATAACGAGGAAGAAGAATCTCTGTGGGACTGGGGACACTTTACTTGCGATGCTTCTGTTAATTATGACTCGATTCCTTGA 696 0.4885 MENQPPGFRFYPTEEELVAFYLHNKLQGGSDHLSRVIPDIGIYDFEPSQLPKLAGERCRADTEQWFFFSPRQEREARGGRPNRTTACGYWKATGSPGYVYSSDNKVIGLKKTMVYYRGKAPSGRKTKWKMNEYRAIEFSHQSSVPTPKLRHEFSLCRVYVVSGSFRAFDRRPLACSTCGQDQDIRVDESSSRGTSHPLPDANPNVNNEEEESLWDWGHFTCDASVNYDSIP 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4395g00012 231 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Pral4395g00012 231 MobiDBLite consensus disorder prediction 185 209 - -
Pral4395g00012 231 MobiDBLite consensus disorder prediction 191 209 - -
Pral4395g00012 231 SUPERFAMILY NAC domain 3 160 IPR036093 GO:0003677|GO:0006355
Pral4395g00012 231 Pfam No apical meristem (NAM) protein 5 134 IPR003441 GO:0003677|GO:0006355
Pral4395g00012 231 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
Pral4395g00012 231 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4395g00012 Pral-Chr4395 33132 34248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4395g00012 7 220 NAC Transcription Factor Family AT5G22380 57.269 2.64e-87 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4395g00012 NAM 1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4395g00012 - - gmx:100780264 300.827