Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00030 ATGCGAGGAGAGGAGAGAATGACCGACCTGGTTTCGAGGGAAGCGCAGATGTCGATCGCTGCTTCGTCCATGTTTCCTGGATTCAGGTTCTGTCCTACCGATGAAGAGTTGATTTCCTATTATCTCAGGAAGAAGTTGGACGGCCATGAAGAGAGCGTTCACGTCATTTCTGAGGTTGAGATTTGCAAATATGAGCCCTGGGATTTACCAGCCAAATCATTCATTCAATCGGATAACGAGTGGTTCTTCTTCTCCCCTCGTGGAAGGAAGTACCCAAATGGTTCACAAAGTAAAAGGGCAACCGAATGTGGCTATTGGAAGGCCACTGGAAAAGAGCGCAATGTGAAGTCAGGTTCTAATGTTATAGGCACCAAGAGAACTTTGGTATTCCATCTGGGTCGTGCCCCAAAAGGGGAAAGAACTGAATGGATTATGCACGAGTACTGTGTCAACGACAAATCCCAGGATTCTTTAGTCGTTTGTCGGCTAAAGAGGAATGCAGATTTTCGTCAGAACGATGCTTCAAACGGAGCATCTTCAAGTCAACAGCAGGCAGTGAATTCTCATGAAAGCAACTGTGCTGTCTCCGAAGCTGAGATAGACCAAAGGGGTGTTTCCGAACAAGATAAAGGGGCCGGATGCAGCTCAAAACGCAGCAGTTGTAGTGACCATTCTCCTTTAGTGGAGCAAATTGATTCTGCCTCTGAATCGAATCAAAGAACAGCCAACTATGACCCTGCTGTGACGGAATATTCGAGTCACCAAAAGGAGGTGGATGACGAGGATTGTTATGCTGAGATACTAAAGAATGATATCGTCAAGTTAGATGATTCTTCACTGACCTTGCAAGAGGCTCACACGAGACCGCAGGATCATCCCCAGACATTTGCGTTCCAAGGCACAGCTCCACGAAGAATTAGGTTAAGAGTAGATAAATCAAGGCGTTCTGTTTCTCCAGCACTTGGTTTCCCAACCTCAAAGCGCCCATCCCAGAGTACCAACCTCTTTGGTACATTGACAAATCGAGTGCTGATATGTGTTCTCTTCGTTTTAACTTTGATAGCCCTATATCTGTCCTTAATGGGTTTGGGGAGTCTCAAACCAGTGAAAAGCTGGGAGAGATTTGGTTCCGTGTGTAAATTATGA 1146 0.459 MRGEERMTDLVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKLDGHEESVHVISEVEICKYEPWDLPAKSFIQSDNEWFFFSPRGRKYPNGSQSKRATECGYWKATGKERNVKSGSNVIGTKRTLVFHLGRAPKGERTEWIMHEYCVNDKSQDSLVVCRLKRNADFRQNDASNGASSSQQQAVNSHESNCAVSEAEIDQRGVSEQDKGAGCSSKRSSCSDHSPLVEQIDSASESNQRTANYDPAVTEYSSHQKEVDDEDCYAEILKNDIVKLDDSSLTLQEAHTRPQDHPQTFAFQGTAPRRIRLRVDKSRRSVSPALGFPTSKRPSQSTNLFGTLTNRVLICVLFVLTLIALYLSLMGLGSLKPVKSWERFGSVCKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00030 381 MobiDBLite consensus disorder prediction 212 244 - -
Pral4394g00030 381 MobiDBLite consensus disorder prediction 171 195 - -
Pral4394g00030 381 Pfam No apical meristem (NAM) protein 26 149 IPR003441 GO:0003677|GO:0006355
Pral4394g00030 381 SUPERFAMILY NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
Pral4394g00030 381 ProSiteProfiles NAC domain profile. 24 166 IPR003441 GO:0003677|GO:0006355
Pral4394g00030 381 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 235 - -
Pral4394g00030 381 MobiDBLite consensus disorder prediction 171 244 - -
Pral4394g00030 381 Gene3D NAC domain 33 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00030 Pral-Chr4394 204329 206677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00030 11 296 NAC Transcription Factor Family AT2G27300 52.595 9.38e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4394g00030 NAM 3e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00030 - - cam:101495489 482.641