Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00021 ATGGCGACGTTCTTTCATGGAGGCAGTTCAGAAATCCAATCATCTGGTGCTTCTGCTGCCGCCGCCGCTGGTGATGGCTTCCACACACTTTACCTTCTCAACCCCAGCACCACCACCCCCTACGCTCCTTACTCCGATACAAGTCCCCACCCTCAACCGACGCCCAACATGCTTCTTCTCAATCCGAATAACTCTCCGCCCAACGCGCTCAACCTCGCCACCCTCTCCCACGCGCCACCTCCTTCCTCCTCCGACCATAACCCCGACGATCCCACCCGTCCCTCCTTCCTTGGACACGAAATCTCTGCCTTTCACGGCTTCACCCCCTCGGCTACTCCTCCTCGTGTCCACTACAACCTCTGGGGTTCAATGATTGATCCCCACCCAACATCAGCCGTGGCAACCGCGTCTAGCAGTTCTGGTGGGGCTCCCTCCGCCTCCGCCTCCGCCACCTTAGACGTGTCGCCCCATATGAGTTTCAGGAGGCCTACTCAGCAGGGTCTGTCGCTGAGCCTGTCATCTCAACAGACAGCTTATAGGTCGCTTTCCGGCGAGCTAGACGTTCCTGGACAACCTCATCAGGCTTCAGCCATACCAACCTCGAGCTGCGATGAAGTGATGAGGATTCTGGTTCCGAGTAATCATGCTTCGTCGAACGGAATTTCGAGTGTGCAGAGTTTTGTTTTAGGATCCAAGTATTTGAGAGCGGCTCAGGAGGTTTTGGATGAAGTCGTTAATGTTGGTAATAAGGGAATCAGCCAAGAGGGGGCCATGAAGGAGAAAATGAAAGCAAATAAAGAATCGACATCCGGTGGGAATCGTGACGTTTCAAGTGGTGGTGATGGAGGAGGAGGAGGAGAAGAAAATAGTGGAAATGGTAAGCAAGGCGGTGAACTCAGTACAGCACAGAGACAAGAACTTCAGATGAAGAAGTCCAAGCTGGTCACCATACTTGACGAGGTGGAACAAAGGTACAGACAGTATCACCACCAAATGCAGATAGTGATAGCTTCATTCGAGCAGGCTGCGGGATATGGTGCAGCAAAAACTTACACATCCCTTGCCCTAAAGACCATCTCCAAGCAATTTCGATGTCTCAAAGACGCAATCGCTTCACAGATAAGAGCAACAAGCAAGACCTTGGGTGAAGATGATTGCTTGGGAGCTAAGGTAGAAGGTTCGAGGCTGAGGTTTGTGGACCATCATCTTCGCCAACAACGGGCTTTACAGCAACTGGGAATGATGCAGCACAATGCTTGGAGACCCCAAAGAGGCTTGCCTGAACGAGCCGTCTCCATTCTTCGCGCTTGGCTCTTCGAGCATTTTCTTCACCCCTATCCCAAGGACTCCGATAAAGTTATGCTCGCAAAACAAACCGGGCTTTCTCGCAGCCAGGTGTCAAACTGGTTTATAAATGCGAGAGTTCGGCTATGGAAACCCATGGTGGAAGAAATGTACGTGGAGGAAATGAAAGAGCAAGGGGGGAATAATAAGGAGGTGGGGTCAAGCAGCAAGGATAATAATCCACAGCCACAAGATCCAGGTGGGCTTCGGCTCGATCATCATCATCATCAGATGAAAGGCTTCCAATCAAATCCAGATCATCAAAGCTTGAATAACCAAACAACTACTCCGACCGACATCTCAAATTCCTCAATCTACCAGCTCCATCCTCCTCATCACTCTTCAGGATTCGCCGTAGCTGCAGGATCAATAAGAACGAGTCCCAAAAAACCAAGAAGTTCAGAAGTAATGAACAACTCGCCAAGCAGTATCGTGTCGGTGGACATAGAAATGAAGCCTGGAGACACAGGGAGATCAGAAGGCAACGCAAAGTTTCCTCTGATGAGTAATAATGGGAGTGATGGAGGAGGATATGGAGGGTTCACCATGGAAGAAATGGGAAGGTACAACGTGGCCGACCAATTGGCTCCGAGGTTCCATGGAAACGGTGTGTCGCTCACTCTGGGACTTCCCCACAGTACAGACAACCTTTCCCACCATGGATTTCTGTCGCACAATATGAACTTGACGACTGATGGAACCGACTTCTGTGAGATGAACGCTCCGCCGTCTCATTCCAACCCCAGTTATGAGAATATGGATCACATTCAGAACAGAAAGAGGTTTGCTGCCCAGTTATTGCCAGATTTTGTGGCCTTGTGA 2166 0.506 MATFFHGGSSEIQSSGASAAAAAGDGFHTLYLLNPSTTTPYAPYSDTSPHPQPTPNMLLLNPNNSPPNALNLATLSHAPPPSSSDHNPDDPTRPSFLGHEISAFHGFTPSATPPRVHYNLWGSMIDPHPTSAVATASSSSGGAPSASASATLDVSPHMSFRRPTQQGLSLSLSSQQTAYRSLSGELDVPGQPHQASAIPTSSCDEVMRILVPSNHASSNGISSVQSFVLGSKYLRAAQEVLDEVVNVGNKGISQEGAMKEKMKANKESTSGGNRDVSSGGDGGGGGEENSGNGKQGGELSTAQRQELQMKKSKLVTILDEVEQRYRQYHHQMQIVIASFEQAAGYGAAKTYTSLALKTISKQFRCLKDAIASQIRATSKTLGEDDCLGAKVEGSRLRFVDHHLRQQRALQQLGMMQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLSRSQVSNWFINARVRLWKPMVEEMYVEEMKEQGGNNKEVGSSSKDNNPQPQDPGGLRLDHHHHQMKGFQSNPDHQSLNNQTTTPTDISNSSIYQLHPPHHSSGFAVAAGSIRTSPKKPRSSEVMNNSPSSIVSVDIEMKPGDTGRSEGNAKFPLMSNNGSDGGGYGGFTMEEMGRYNVADQLAPRFHGNGVSLTLGLPHSTDNLSHHGFLSHNMNLTTDGTDFCEMNAPPSHSNPSYENMDHIQNRKRFAAQLLPDFVAL 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00021 721 FunFam BEL1-like homeodomain protein 9 423 485 - -
Pral4394g00021 721 ProSiteProfiles 'Homeobox' domain profile. 417 480 IPR001356 GO:0003677
Pral4394g00021 721 Pfam Homeobox KN domain 437 476 IPR008422 GO:0003677|GO:0006355
Pral4394g00021 721 SMART HOX_1 420 484 IPR001356 GO:0003677
Pral4394g00021 721 Pfam Associated with HOX 228 371 IPR006563 -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 256 299 - -
Pral4394g00021 721 SUPERFAMILY Homeodomain-like 421 487 IPR009057 -
Pral4394g00021 721 Coils Coil 304 324 - -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 530 549 - -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 38 83 - -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 496 511 - -
Pral4394g00021 721 Gene3D - 415 495 - -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 131 176 - -
Pral4394g00021 721 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 138 503 - -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 38 98 - -
Pral4394g00021 721 Coils Coil 721 721 - -
Pral4394g00021 721 SMART prehox3 222 372 IPR006563 -
Pral4394g00021 721 MobiDBLite consensus disorder prediction 490 549 - -
Pral4394g00021 721 CDD homeodomain 420 481 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00021 Pral-Chr4394 117167 121262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00021 1 720 Homeobox Transcription Factor Family AT2G35940 42.765 1.90e-137 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pral4394g00021 POX 7.3e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00021 - - gmx:100779075 669.463