Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00016 ATGGATGTCGATTCCTCGATGGCACCGGAAAGCGATCACGATCGTGCTGTGCAAAATCACACTGCTAGTCAGCCTCCGGCAGCTATGGATAGAGAGCAGCGGGGAGAGCAGCCGTCGTCCGGAGACGAGTCTCAGGCACAGTCGCCAGTGCAGCAGCAACAGCAACAGCAGGCGGCTGCTCAGCCGCAGCAGAGTCCTGTTGTTGGACCTAGGCTGGCGCCAACTTACACTGTCGTGAATGCAATTCTAGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGCGGCCACACTTTGACGGCGGTGGCAGCTGTTGGAGAGGAGGGTACACCTGGATACATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGGAATTCTGCGGCTGCTGGGACTCCTTCATCCGCCGGGAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATGTTCACTGTTATGATGCCTTAACTAATAAGTGGTCTAGGATAACTCCCTATGGAGAACCTCCAACCCCGAGGGCTGCACATGTGGCAACTGCTGTAGGAACGATGGTAGTAATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGACCACGATGGCACAGAGTTGTTGTTCAAGGCCCTGGACCAGGGCCACGTTATGGACATGTGATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCTGCCAAGCCTTATGAATGGCATAAATTGGAGCCAGAAGGAGAAGGCCCACCACCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGGCTTCTTCTGCTTTGTGGAGGAAGGGATGCCAATAGTGTGCCATTGGCTAGTGCATATGGACTTGCAAAGCATAGGGATGGTCGATGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTCGTTAATGCAAGGCTCCATGTGTCGGGAGGGGCTCTTGGTGGAGGGCGCATGGTAGAAGACTCATCAAGTGTTGCAGTGTTGGATACTGCTGCTGGTGTTTGGTGTGATACCAAATCTGTTGTTACCAGTCCAAGAACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACAAGGCGTTGTAGGCATGCAGCTGCTGCCATTGGTGACCTTATTTTTATATATGGAGGTTTACGTGGTGGAGTATTGCTCGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAAATGCTGCTTCGCATGCTGCTGCTGCAGCAGCTGCATATAATGTGCAAGCAGGACGATTACCTGGGCGATATGGATTTGTTGATGATAGGAACAGGATGTCTGAAGCAACTGCTGATGGTTCAGTTGTCCTGGGAAATCCTGTGGCTCCCCCTATAAACGGTGACGTGTATACTGATATTAGCACTGAGAACGCCCTGCTTCAGGGACCCCGGAGGACTAGCAAAGGCGTTGAGTATCTTGTTGAAGCATCAGCAGCAGAAGCTGAAGCTATAAGTGCCACATTAGCTGCTGCTAAGGCACGTCAAGAGAATGGAGAAGTTGAATTACCTGACAGAGACCGTGGGGCTGAGGCTACCCCTAGTGGGAAACCAATATCTTCGCTGATTAGGCCTGATTTGGCAGGGCCAAATAATATTATTCCTGGTGGAGTTCGGCTGCATCATAGAGCTGTTGTCATAGCTGCCGAGACTGGTGGAGCATTGGGTGGTATGGTTAGACAGCTTTCAATTGACCAGTTTGAAAATGAAGGCAGGCGAGTTAGTTATGGAACTCCAGAAAGTGCAACTGCGGCTAGAAAATTATTAGATCGGCAGATGTCCATCAATAGTGTCCCAAAGAAGGTCATAGCTCACCTATTAAAACCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTTTTAGATTGCAATGAGATTGCAGATCTTTGTGATAGCGCAGAGCGGATATTTTCAAGTGAACCAACTGTTTTACAACTTAAGGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGGGATCTGATGCGTCTCTTTGATGAATATGGTTCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTTGGAGATTATGTTGACCGGGGTCAACACAGCCTGGAAACTATAGCCCTTCTACTTGCTCTGAAGGTTGAATGTCCCAACAATGTGCATTTAATACGAGGAAATCATGAAGCAGCAGATATTAATGCTCTTTTTGGTTTCCGCATTGAGTGCATTGAGAGGATGGGTGAGAGGGATGGAATTTGGGCATGGCATAGGATCAATCGTTTGTTTAATTGGCTTCCCCTGGCGGCCCTAATTGAGAAAAAGATTATTTGCATGCATGGTGGTATTGGTCGTTCAATAAATCATGTCGAACAAATTGAGAGTCTTCAGCGTCCAATTACAATGGAAGCAGGATCAATTGTGCTGATGGATCTATTATGGTCTGATCCTACAGAGAATGACAGTGTAGAAGGACTGCGACCGAATGCTAGGGGTCCAGGGTTAGTTACTTTTGGGCCGGATCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCTCATGAATGTGTGATGGATGGCTTTGAGCGTTTTGCTCAGGGACATTTGATCACCCTATTCTCAGCTACAAATTACTGTGGTACTGCAAATAATGCTGGAGCGATATTAGTCTTGGGCAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCACTTTCTTCCCCGGAAGCATCACCAGAACGTCATATTGAAGATACATGGATGCAGGAGTTGAATGCCAATAGACCACCGACTCCAACTAGAGGTCGTCCTCAAGTTGCTAATGATCGAGGTTCACTTGCTTGGATATAA 3018 0.4824 MDVDSSMAPESDHDRAVQNHTASQPPAAMDREQRGEQPSSGDESQAQSPVQQQQQQQAAAQPQQSPVVGPRLAPTYTVVNAILEKEEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAAAGTPSSAGNAGIRLAGATADVHCYDALTNKWSRITPYGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTNAASHAAAAAAAYNVQAGRLPGRYGFVDDRNRMSEATADGSVVLGNPVAPPINGDVYTDISTENALLQGPRRTSKGVEYLVEASAAEAEAISATLAAAKARQENGEVELPDRDRGAEATPSGKPISSLIRPDLAGPNNIIPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETIALLLALKVECPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIESLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPALSSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00016 1005 Gene3D - 197 312 IPR015915 GO:0005515
Pral4394g00016 1005 Gene3D - 74 196 IPR015915 GO:0005515
Pral4394g00016 1005 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1005 - -
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 1 17 - -
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 898 918 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 808 834 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 920 936 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 838 865 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 770 794 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 702 729 IPR006186 GO:0016787
Pral4394g00016 1005 PRINTS Serine/threonine phosphatase family signature 737 764 IPR006186 GO:0016787
Pral4394g00016 1005 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Pral4394g00016 1005 FunFam Serine/threonine-protein phosphatase 273 473 - -
Pral4394g00016 1005 ProSitePatterns Serine/threonine specific protein phosphatases signature. 771 776 IPR006186 GO:0016787
Pral4394g00016 1005 FunFam Serine/threonine-protein phosphatase 72 269 - -
Pral4394g00016 1005 FunFam Serine/threonine-protein phosphatase 638 978 - -
Pral4394g00016 1005 Pfam Calcineurin-like phosphoesterase 702 909 IPR004843 GO:0016787
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 39 70 - -
Pral4394g00016 1005 SUPERFAMILY Metallo-dependent phosphatases 659 964 IPR029052 -
Pral4394g00016 1005 SMART pp2a_7 674 958 IPR006186 GO:0016787
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 550 564 - -
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 981 1005 - -
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 548 578 - -
Pral4394g00016 1005 MobiDBLite consensus disorder prediction 1 70 - -
Pral4394g00016 1005 PIRSF STPPP_BSU1 41 1005 IPR012391 GO:0004721|GO:0009742
Pral4394g00016 1005 CDD MPP_Bsu1_C 654 956 IPR041758 -
Pral4394g00016 1005 Gene3D - 638 970 IPR029052 -
Pral4394g00016 1005 Gene3D - 323 463 IPR015915 GO:0005515
Pral4394g00016 1005 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00016 Pral-Chr4394 71147 81826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00016 666 901 Calmodulin-binding Proteins AT5G63870 29.044 5.78e-26 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00016 - - zju:107403588 1774.6