Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00010 ATGCCCATGGATCCCTTGATCCGCAAGCTGCACCGCCGCCTTCCTGCATGGCTTCACCGATCTCGCTCTGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAACGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGATATTTTCTACAGCGAAGTGCAGTACTTGGGCCGCTTGCATCATCGACACCTTTTGTCGCTCAAAGGATTTTCCTTGAAACACAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCTCTGAAGACACCCTTAAATTGGAGGACAAGGTTAAAAATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGCTTCTCTTCGTTGAACAACCACCATGTCATGTCTCCATCAGCTCTAGCAATATCATGTTAGATGATACCTTTACGGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGTTGGAAATCCCGTTATGATGCCGAATTCAAAAGATGACATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCCTCAGAGATGGAAGGTTCCGATCTAATAGAATGGATCCAGGAATCATGCTTCTACAGTTCCATTCATAATATGGTAGACCCTGATCTTGGCGACAATTACGATTCAAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAAGGACAAGCCTGTATTTACGATCCCCCAGTTACTTCGATATCTTCAACAGAAGGTAGATATTCCTCGTGACTAA 903 0.412 MPMDPLIRKLHRRLPAWLHRSRSDQIYFMRRLSYKDVKRATDGFHRIIYSNSQVAAYTAKFEDGSVSLVKEIKDFDQADDIFYSEVQYLGRLHHRHLLSLKGFSLKHKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLKIAIDVVAALEYLLLFVEQPPCHVSISSSNIMLDDTFTAKLSDFGLLTCVGNPVMMPNSKDDMRQKSGNIIFQLGVFILELVTGQSSEMEGSDLIEWIQESCFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSKDKPVFTIPQLLRYLQQKVDIPRD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00010 300 Gene3D Transferase(Phosphotransferase) domain 1 116 297 - -
Pral4394g00010 300 FunFam probable receptor-like protein kinase At1g49730 210 299 - -
Pral4394g00010 300 FunFam Protein kinase superfamily protein 18 114 - -
Pral4394g00010 300 Gene3D Phosphorylase Kinase; domain 1 15 114 - -
Pral4394g00010 300 SUPERFAMILY Protein kinase-like (PK-like) 25 268 IPR011009 -
Pral4394g00010 300 PANTHER OS01G0253100 PROTEIN 27 295 - -
Pral4394g00010 300 ProSiteProfiles Protein kinase domain profile. 34 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4394g00010 300 SMART tyrkin_6 26 291 IPR020635 GO:0004713|GO:0006468
Pral4394g00010 300 Pfam Protein tyrosine and serine/threonine kinase 68 189 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00010 Pral-Chr4394 47209 50454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00010 27 296 Receptor kinase-like Gene Family AT3G19300 38.621 5.22e-59 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral4394g00010 PK_Tyr_Ser-Thr 3.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00010 - - qsa:O6P43_028604 420.624