Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00009 ATGCCCATGGATCCCTTGATCCGCAAGCTGCACCGCCGCCTTCCTGCATGGCTTCACCGATCTCGCTCTGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAACGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGATATTTTCTACAGCGAAGTGCAGTACTTGGGCCGCTTGCATCATCGACACCTTTTGTCGCTCAAAGGATTTTCCTTGAAACACAAGAGCAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCTCTGAAGACACCCTTAAATTGGAGGACAAGGTTAAAAATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGCTTCTCTTCGTTGAACAACCACCATGTCATGTCTCCATCAGCTCTAGCAATATCATGTTAGATGATACCTTTACGGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGTTGGAAATCCCGTTATGATGCCGAATTCAAAAGATGACATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCCTCAGAGATGGAAGGTTCCGATCTAATAGAATGGATCCAGGAATCATGCTTCTACAGTTCCATTCATAATATGGTAGACCCTGATCTTGGCGACAATTACGATTCAAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAAGGACAAGCCTGTATTTACGATCCCCCAGTTACTTCGATATCTTCAACAGAAGGTAGATATTCCTCGTGACTAA 906 0.4128 MPMDPLIRKLHRRLPAWLHRSRSDQIYFMRRLSYKDVKRATDGFHRIIYSNSQVAAYTAKFEDGSVSLVKEIKDFDQADDIFYSEVQYLGRLHHRHLLSLKGFSLKHKSRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLKIAIDVVAALEYLLLFVEQPPCHVSISSSNIMLDDTFTAKLSDFGLLTCVGNPVMMPNSKDDMRQKSGNIIFQLGVFILELVTGQSSEMEGSDLIEWIQESCFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSKDKPVFTIPQLLRYLQQKVDIPRD 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00009 301 PANTHER OS01G0253100 PROTEIN 27 296 - -
Pral4394g00009 301 FunFam Protein kinase superfamily protein 18 115 - -
Pral4394g00009 301 Gene3D Transferase(Phosphotransferase) domain 1 117 298 - -
Pral4394g00009 301 SUPERFAMILY Protein kinase-like (PK-like) 25 269 IPR011009 -
Pral4394g00009 301 Gene3D Phosphorylase Kinase; domain 1 15 115 - -
Pral4394g00009 301 FunFam probable receptor-like protein kinase At1g49730 211 300 - -
Pral4394g00009 301 ProSiteProfiles Protein kinase domain profile. 34 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4394g00009 301 Pfam Protein tyrosine and serine/threonine kinase 68 190 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00009 Pral-Chr4394 47207 50454 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00009 27 297 Receptor kinase-like Gene Family AT3G19300 38.621 3.78e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral4394g00009 PK_Tyr_Ser-Thr 4.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00009 - - qsa:O6P43_028604 416.001