Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00008 ATGCCCATGGATCCCTTGATCCGCAAGCTGCACCGCCGCCTTCCTGCATGGCTTCACCGATCTCGCTCTGCCCTGAATTCAGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAACGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGATATTTTCTACAGCGAAGTGCAGTACTTGGGCCGCTTGCATCATCGACACCTTTTGTCGCTCAAAGGATTTTCCTTGAAACACAAGAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCTCTGAAGACACCCTTAAATTGGAGGACAAGGTTAAAAATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGCTTCTCTTCGTTGAACAACCACCATGTCATGTCTCCATCAGCTCTAGCAATATCATGTTAGATGATACCTTTACGGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGTTGGAAATCCCGTTATGATGCCGAATTCAAAAGATGACATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCCTCAGAGATGGAAGGTTCCGATCTAATAGAATGGATCCAGGAATCATGCTTCTACAGTTCCATTCATAATATGGTAGACCCTGATCTTGGCGACAATTACGATTCAAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAAGGACAAGCCTGTATTTACGATCCCCCAGTTACTTCGATATCTTCAACAGAAGGTAGATATTCCTCGTGACTAA 915 0.4131 MPMDPLIRKLHRRLPAWLHRSRSALNSDQIYFMRRLSYKDVKRATDGFHRIIYSNSQVAAYTAKFEDGSVSLVKEIKDFDQADDIFYSEVQYLGRLHHRHLLSLKGFSLKHKRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLKIAIDVVAALEYLLLFVEQPPCHVSISSSNIMLDDTFTAKLSDFGLLTCVGNPVMMPNSKDDMRQKSGNIIFQLGVFILELVTGQSSEMEGSDLIEWIQESCFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSKDKPVFTIPQLLRYLQQKVDIPRD 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00008 304 PANTHER OS01G0253100 PROTEIN 29 299 - -
Pral4394g00008 304 Gene3D Transferase(Phosphotransferase) domain 1 120 301 - -
Pral4394g00008 304 SMART tyrkin_6 30 295 IPR020635 GO:0004713|GO:0006468
Pral4394g00008 304 ProSiteProfiles Protein kinase domain profile. 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4394g00008 304 FunFam Protein kinase superfamily protein 20 118 - -
Pral4394g00008 304 Pfam Protein tyrosine and serine/threonine kinase 72 193 IPR001245 GO:0004672|GO:0006468
Pral4394g00008 304 SUPERFAMILY Protein kinase-like (PK-like) 27 272 IPR011009 -
Pral4394g00008 304 Gene3D Phosphorylase Kinase; domain 1 16 118 - -
Pral4394g00008 304 FunFam probable receptor-like protein kinase At1g49730 214 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00008 Pral-Chr4394 47206 50454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00008 20 300 Receptor kinase-like Gene Family AT3G19300 38.206 9.18e-61 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral4394g00008 PK_Tyr_Ser-Thr 3.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00008 - - qsa:O6P43_028604 415.231