Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4394g00007 ATGCCCATGGATCCCTTGATCCGCAAGCTGCACCGCCGCCTTCCTGCATGGCTTCACCGATCTCGCTCTGCCCTGAATTCAGATCAAATATACTTTATGAGGCGACTTTCATACAAGGATGTTAAACGAGCAACGGATGGTTTTCACAGAATTATCTATAGCAATTCTCAAGTTGCTGCATATACGGCCAAATTTGAAGATGGTAGCGTTTCTTTGGTGAAAGAAATAAAGGATTTTGATCAAGCAGATGATATTTTCTACAGCGAAGTGCAGTACTTGGGCCGCTTGCATCATCGACACCTTTTGTCGCTCAAAGGATTTTCCTTGAAACACAAGAGCAGATTGCTCATTTTTGACAGCATAGAGAATGGAAGCTTAAAGGATCATCTAAATGATCCTCTGAAGACACCCTTAAATTGGAGGACAAGGTTAAAAATAGCTATTGATGTTGTGGCTGCCCTGGAATACTTGCTTCTCTTCGTTGAACAACCACCATGTCATGTCTCCATCAGCTCTAGCAATATCATGTTAGATGATACCTTTACGGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGTTGGAAATCCCGTTATGATGCCGAATTCAAAAGATGACATGAGGCAGAAAAGTGGTAACATAATATTCCAATTGGGAGTTTTCATACTGGAGCTTGTCACTGGTCAGTCCTCAGAGATGGAAGGTTCCGATCTAATAGAATGGATCCAGGAATCATGCTTCTACAGTTCCATTCATAATATGGTAGACCCTGATCTTGGCGACAATTACGATTCAAGGGAGTTAAAAACCCTTCTAGCTGTTGCAAAGTTATGTATCAAATCAAAGGACAAGCCTGTATTTACGATCCCCCAGTTACTTCGATATCTTCAACAGAAGGTAGATATTCCTCGTGACTAA 918 0.4139 MPMDPLIRKLHRRLPAWLHRSRSALNSDQIYFMRRLSYKDVKRATDGFHRIIYSNSQVAAYTAKFEDGSVSLVKEIKDFDQADDIFYSEVQYLGRLHHRHLLSLKGFSLKHKSRLLIFDSIENGSLKDHLNDPLKTPLNWRTRLKIAIDVVAALEYLLLFVEQPPCHVSISSSNIMLDDTFTAKLSDFGLLTCVGNPVMMPNSKDDMRQKSGNIIFQLGVFILELVTGQSSEMEGSDLIEWIQESCFYSSIHNMVDPDLGDNYDSRELKTLLAVAKLCIKSKDKPVFTIPQLLRYLQQKVDIPRD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4394g00007 305 PANTHER OS01G0253100 PROTEIN 29 300 - -
Pral4394g00007 305 FunFam probable receptor-like protein kinase At1g49730 215 304 - -
Pral4394g00007 305 ProSiteProfiles Protein kinase domain profile. 38 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4394g00007 305 Gene3D Transferase(Phosphotransferase) domain 1 121 302 - -
Pral4394g00007 305 SUPERFAMILY Protein kinase-like (PK-like) 27 273 IPR011009 -
Pral4394g00007 305 Gene3D Phosphorylase Kinase; domain 1 16 119 - -
Pral4394g00007 305 FunFam Protein kinase superfamily protein 20 119 - -
Pral4394g00007 305 Pfam Protein tyrosine and serine/threonine kinase 72 194 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4394g00007 Pral-Chr4394 47205 50454 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4394g00007 20 301 Receptor kinase-like Gene Family AT3G19300 38.206 6.67e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Pral4394g00007 PK_Tyr_Ser-Thr 4.9e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4394g00007 - - qsa:O6P43_028604 410.609