Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4393g00018 ATGGCTCCCTCGTCTCCAATCGATGCTGATTCACTCCCCTCGTCAATGGCACCCCAAAACATGGAAACCAACATTCAGCCGTTCTATGTTCTTCACAAAGCTTCATCTCGAGGAAAAGATAGAAAATCAGCGGGACAGGGAAAAAAGAGAAGAAGAAAAGACGCACCTTCATCGCTGCAAAGCCCTAAGAAACTTGAAGGGAGTATTGCGGAAGAGCATGATGGCCATCATCTTCAGCAGTTGCAATTTGAAGCATTTTGCTCTGTCTGGTCAAAAATTGAGTCTACTATCAAGGATGTTTTGAGAGATACCAATGCTAGTGTTTTTAATGAAATACGACAATGGGTTCTGGCATGCTTCAATGCTACTAGATCAACTAGAGAACCTAGCTTTGCCAACTCAGTTGGATCTTTTCCTGTTCTGAACGAAAGTACTCCTAGACAGCTATTCACTGGGTTGGTGATAACCAAAAACATGGAGTTTGTTGATGACATTTTAACGTTTGAAGAGCTTAGCCACTTCTTGGAATTGCAAGGTTGCCATGTTGGTATGCTATCATCCTTAGACTTTTCTGTGAAAAATGGGATTGTTGGTTGCCTAAAAGCTTTGTTGCGAGAGTTTATGCACGCCACTATGGATTCAGCTGACATATCAAACTTAGCATCATGGTATAGAGAACAGGGAAACCACAATAAGCCCCTGGTTCTTATCATTAATGATGTGGAAAGATGCTCTCGGACGGTCTTATCTGATTTTATCCCCATGTTAAGTGAATGGGTAAACAGGCTGCCAGTGATCTTGATATTTGGAGTTGCGACCACAGTGGATTCCCTAAAAAACATTCTTCCATCACATGTTCTTCACCATTTGTGCCCCGCTAAATTTATGCTTGGATCACCAGCTGACAGAATGGATTCAATTATCAAGGCTGTTCTTGTGAAGCATTGCGCTATATTCGGTATTGGTTACAAAGTGGTTCTATTTCTTAGAAACAACTTCTTAAACAAGGATGGGACATTAACATCTTTTATCCGAGGTTTGAAGATAGCTTGCATGTTACATTTCTCTGTGGAGCCTCTAAGTATCATACTTAGCCAAGCACTCGCTGAAGAAGACCAGGAAGATGGAAAATCTGCGTTATCATCTGATACAGTGTTGAAGTATGTGCATGGACTTCCATCATGTGCAAGGAATCAAATGGCTGATGAGACTGGGAGAAATTTAGCTCAGGGCCTGTCAACTTTGGTTAGAGCGAAGAAGCTTTGGAGCACTGCGGTCCTGTGCCTGCATGAAGCCGGAAAATATAATAGAATTCGACTGCTGGATGTGTTTTGTGAAGTGCTCAATCCAGATCTGTTCCCACCAAGGGCTTCTGATTGTCACGTCGCAGATGAAAATGATTGTGGCTTGTCCTCATCCAATTCCTACCAACAGTGTTCTATTATTCAAAGGGGAGGATGTATTTCCCAGATACTTCGCAAACTGAGGGATCTACCTCCTGCAATGCTATTTCAGTTGATTAGGAGCTGGGAAAAATGCACTGCAGGTGTTGCTGAGATTCATGACAAATTAAAAACGTTGCAATCTTCACTAAGATGTGAAGATGGAAAAAGGCCAACCAAGAGTTCTGACATTTCCAAGAAACATGCGACCAGGATTTCATTAAACAGTGAAAAGGACTCAAGAATCTTAAATTCACAAGTTATCGCATTCATGAATGACTTGGTCTGGAATTATATGAGGCCCATTTCATGCATGCCTTTCCATGAAATTGCCTGTTTTAATGAGGTTGAGAAGCTACAACTGGCTTTGACTGGAGATCCAAGAAGCAGAATTCAAGTTGATCTTTTGGACGCCAACAAGATTTTACGGTGCAGCTGCTGCAAAAAGAGTAGCTCTGCACTATTGCCGTCCATGCATGATTCCTCAATTATGTATTCCCTGGCTGAGGAGCATGGTGATGTAATCAATCTTCATGACTGGTTCAAGTCCTTTCAAACAATTATTCTTGACCACAAGAATAAGCGCAAACAAAAGTTGAAGCAATCCCCACATAAAAGGAAGAGAAAAGATACAAATGAATCTAGTGATCCAAGTGAAGCGTCAATTCAAGCACGTTTTTGCAATGCAGTTACAGAGTTGCAGATCATTGGCTTACTAAGAATGCCTAGCAAGAGACGCCCTGATTGTGTACAGAGAGTAGCCTTCGGATTTTGA 2217 0.4172 MAPSSPIDADSLPSSMAPQNMETNIQPFYVLHKASSRGKDRKSAGQGKKRRRKDAPSSLQSPKKLEGSIAEEHDGHHLQQLQFEAFCSVWSKIESTIKDVLRDTNASVFNEIRQWVLACFNATRSTREPSFANSVGSFPVLNESTPRQLFTGLVITKNMEFVDDILTFEELSHFLELQGCHVGMLSSLDFSVKNGIVGCLKALLREFMHATMDSADISNLASWYREQGNHNKPLVLIINDVERCSRTVLSDFIPMLSEWVNRLPVILIFGVATTVDSLKNILPSHVLHHLCPAKFMLGSPADRMDSIIKAVLVKHCAIFGIGYKVVLFLRNNFLNKDGTLTSFIRGLKIACMLHFSVEPLSIILSQALAEEDQEDGKSALSSDTVLKYVHGLPSCARNQMADETGRNLAQGLSTLVRAKKLWSTAVLCLHEAGKYNRIRLLDVFCEVLNPDLFPPRASDCHVADENDCGLSSSNSYQQCSIIQRGGCISQILRKLRDLPPAMLFQLIRSWEKCTAGVAEIHDKLKTLQSSLRCEDGKRPTKSSDISKKHATRISLNSEKDSRILNSQVIAFMNDLVWNYMRPISCMPFHEIACFNEVEKLQLALTGDPRSRIQVDLLDANKILRCSCCKKSSSALLPSMHDSSIMYSLAEEHGDVINLHDWFKSFQTIILDHKNKRKQKLKQSPHKRKRKDTNESSDPSEASIQARFCNAVTELQIIGLLRMPSKRRPDCVQRVAFGF 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4393g00018 738 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 737 IPR020795 GO:0003677|GO:0005664|GO:0006260
Pral4393g00018 738 CDD Orc3 81 736 - -
Pral4393g00018 738 MobiDBLite consensus disorder prediction 675 700 - -
Pral4393g00018 738 MobiDBLite consensus disorder prediction 8 30 - -
Pral4393g00018 738 Pfam Origin recognition complex winged helix C-terminal 609 736 IPR040855 -
Pral4393g00018 738 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 68 362 IPR045667 -
Pral4393g00018 738 MobiDBLite consensus disorder prediction 1 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4393g00018 1 707 Core DNA Replication Machinery Family AT5G16690 44.306 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4393g00018 K02605 - gmx:100780646 940.643