Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4391g00008 ATGCGTCCCTTCTTCCCCATCTTCTTCTTCGTCTTTCTCATTTTGACCTGCCTGCCTCAGATTTTCTGTTCAAAAACCGTTCTTTCTTCAGGACGCAGGATCCTTCACGAGCCATTTCAGCCATTGGGTTCTGTTCCGCCTGCTCCGCCTCCTAGCCCTCCTCCTTCCCCTCCTGCATCGCCCAACGCTAAATATCCCTTTTCCACGACTACCCCTAATCAATCTGCGTTTTTTCCTACCTACCCTTCACCTCCTCCTCCTCCTTCTCCTGCTTCTTTTGCTTCCTTCCCTGCCAATATCTCCTCTCTTATACTCCCTCACGCATCCAAATCCAAATCCTCTTCCGGAAAACTGCTCGGAGTTGCCATCGGTGCTGTGGTCTGTGCTATTGTTGTCGCTGGCATTTCTGCTTTTGTGTACTGTCGGCGGAGGAGGAAGCGGTACGCTGCCGACGAGAAGACTCTCAGATCCGATAGTAGTCTCCGTCTGTTTCCGCCCAATGCTGAATCTGGTAATGGAGGTCGAAAGGTGAGGCACACTTCTTCAACTAGCTCTGAGTTTCTTTACCTTGGGACCATTGTTAATTCGAGGGCCGTTGAGGATCGTTCTGGTTCGCACGCAAACGATGCTGGTTGGGGTGGGCGTAGTGCAGGCGGCGGTGGAGGAAGTGGCGGTGGTGCTGCTGCTGTGGACCCTCGGAAAATGGACTCGCCGGAGCTTCGTCCACTTCCTCCGCTTGTGCGGCAAGGTTTGAGGCAACAATATGGAGCGGCGCGGGACGATGTGGGTTCTAATACGGCGGATGATGAGGAAGAGGAATTCTACTCGCCCAAAGGATCTCTGGGTGGTCACGAGAGTTCGAATGGCACGGGATCAGGTTCTCGCAGAGTGTATGCGGCGATTGCGAGTGAGAATTTTGTTGGTCGAAGCAGTGAATCGAGTTCTAGCTCGTATTCTTCTTCCACTTCGGGCTCACCGGATCGGTCACACTCGATTAGCCTATCACCGCCGGCAAGCTTGAGCCCCAAAAGATCGCAGCCAAAATCGCCGGAAACTACAGTTGTGGACAGCTCTCCTCTACTGCCATCATCCCCACCGCTACCACGGCCACCACCGCCTGCTCATTCCCGGACTGAAGCGCGCTTGGGCGAGGGATCTTTACGCTCACCGTCAGATAGAAGCCAATTTTCTTTATCTCCGGTTCACAATCAGCATGTTCAATCTTCTTCAATGTCTTCATTATCTTCAACACCAGAGAGAGCTTCTGGTCGAGATGGTAAGTCTCCTTTACTGTCTCCACTCTCGTTATCGCCAAATAGAGCTGCAGGGAAGAACCCAGATGGGGGAGCGAGAGTATCGGGCGTCGCATTTGAAAATGTGCATTCTTCTTCCTCCTCATCTCCTATTTCTTTGTCGCCTGAGAGATGTGTTGAGAAAAAATCAGATGCACCAGGGAAACAAGATGAGAAATTTTCTTATTCGTCGTCAGGATTTCCTGCTGGGAAAATTTCTTGCGCATCACCAAGATTATCCACTACCTCACCTGAAAGGAATGTGGAGAAAATTTCAATGGCATCTCCGCAGAGAAATTCTGAGAAAATTTCCCTTGAGTCTCCAAGATTATCCACGGCATCGTGCGAGGGAGGTGCGGAGGCAGTATCAAGCGCACCATCAAGGTTATCCAATGCATCACCGGGGAGAAATGCGGAGAAAATCTTATGTGTGTCACCTAGATTATCCAATGCTTCGAATCAAAGTGAGAAGTCTCTGTCGTCTTCTTCAGCTTTCTCTCTGCCATCATCACCTGAGAAAGTGGTTGAGCATGGTTTGGATCACTCTCCAAGTCTTTCAAATGTTTCAGATCGTTATAGGCAATCTCCGATGCCAACCCTGCTTTCATCGCCAGAAAGAGAATCGTACAACACTTCGGATCGTTCTGCTACAGTTGAAAATGCTGTGGATCAAACAAGAGTTTCTCCAGCTCCTGCTCCTCCTCCGCCTCTTCAACCACAGCGAAAACACTGGGAGATTCCTATCCTCTCAACAATTTTCCAAAATGCGGAATCTCCTGCTCCTCCTCCACCACCACAGCGGAAACACTGGGAGATTCCACTTTTCTCAACAGCCATTGGTCAGCCTAGAGTTTCTCCCCCTCCCCCTCCACCACCACCGCCTCCTCCTCCACCTCCACCACCCCACCAAAGAACACGAAAGCAATGGGAAATTCCGTCTCCTTCAACTCCCACTGATCAGTCAGTTTCTAGGCCGGCAGCTTTAGTACAACCTTCAAGGCCTTTTGTGTTGCCAAATCCAACAACAGATGTGTCTCCGGTTGAGTTGCCTCCAAATTCTCAACAAAAGAATTTGGGGACAAATGAGGATACTCCAAAACCAAAGTTGAAGCCGTTGCATTGGGATAAAGTGAGAGCTAGCTCTGATCGTGAAATGGTCTGGGATCAGTTGAGGTCAAGCTCTTTTAAATTAAACGAGGAAATGATTGAGACATTGTTTGTTGTGAATACACCACATCCAAAACCAAAGGATACTACACCGCGTTCAGTTCTTCCTACACCAAAACAGGAGGACAGAGTACTTGATCCTAAAAAGTCGCAAAATATTGCAATTTTACTGAGGGCACTTAACGTGACTGTTGAAGAAGTCTGTGAAGCATTATTAGAAGGTAGTGCTGATACACTGGGTACAGAACTACTCGAAAGCTTGTTAAAGATGGCACCAAGCAAGGAGGAAGAACGTAAACTGAAGGAACATAAAGAGGACTCACCAATCAAGCTTGGTCCTGCTGAGAAATTCTTGAAGGCTGTGCTTGGTGTACCATTTGCGTTTAAAAGGGTGGAAGCCATGCTTTACATAGCTAATTTTGAGTCTGAAGTGGAGTATCTCAGGAAGTCGTTTGAAACTCTAGAGGTTGCCTGTGAGGAGCTACGCAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAACCGCATGAATGTAGGGACAAACCGCGGTGATGCACGTGCCTTCAAGCTCGATACACTTCTCAAGCTTGTTGATGTTAAAGGTGCCGATGGGAAGACAACCCTACTGCACTTCGTTGTACAGGAAATTATAAGAACTGAAGGTGCTCGTCTCTCAAGTACTTCCCAAACTCCAAACTCCTCTTCAAGTGAAGATGCCAAGTGCAGGAGGCTTGGTCTACAAGTTGTTTCCAGTCTGAGCTCAGAGCTAGCAAACGTAAAGAAGGCTGCTGCAATGGATTCTGAGGTTCTCAATGGCGATGTCTCCAAACTTTCTAAAGGAATTTCTTACATAACAGAGGTGGTGAGACTAAACGAGGCAACACGGCAAGATGAAAGTGGTAAAAAATTTACAGAATCAATGAACAAATTCATGAGGATGGCCGAGGTGGAGATCCTGAGGATTCAAGCCCATGAAAGTGTTGCTCTTTCTTTAGTGAAGGAGATTACTGAGTATTTCCATGGTAACTTAGCAAAGGAAGAAGCTCATCCATTCAGAATCTTCATGGTGGTGAGAGACTTCTTATCGGTTCTCGACCGAGTCTGCAAAGAAGTTGGTTTAATAAACGAGAGGACCATGGTTAGTTCTGCCCATAGATTCCCAGTCCCAGTAAACCCCATGCTTCCACAACCCCTAAACCCTATGCTTCCACAACCCCTACCTGGATTATTTGGAAAGAGACAATACAGCTCTTCGGATGATGATAGTCCCTCTCCATAG 3753 0.4799 MRPFFPIFFFVFLILTCLPQIFCSKTVLSSGRRILHEPFQPLGSVPPAPPPSPPPSPPASPNAKYPFSTTTPNQSAFFPTYPSPPPPPSPASFASFPANISSLILPHASKSKSSSGKLLGVAIGAVVCAIVVAGISAFVYCRRRRKRYAADEKTLRSDSSLRLFPPNAESGNGGRKVRHTSSTSSEFLYLGTIVNSRAVEDRSGSHANDAGWGGRSAGGGGGSGGGAAAVDPRKMDSPELRPLPPLVRQGLRQQYGAARDDVGSNTADDEEEEFYSPKGSLGGHESSNGTGSGSRRVYAAIASENFVGRSSESSSSSYSSSTSGSPDRSHSISLSPPASLSPKRSQPKSPETTVVDSSPLLPSSPPLPRPPPPAHSRTEARLGEGSLRSPSDRSQFSLSPVHNQHVQSSSMSSLSSTPERASGRDGKSPLLSPLSLSPNRAAGKNPDGGARVSGVAFENVHSSSSSSPISLSPERCVEKKSDAPGKQDEKFSYSSSGFPAGKISCASPRLSTTSPERNVEKISMASPQRNSEKISLESPRLSTASCEGGAEAVSSAPSRLSNASPGRNAEKILCVSPRLSNASNQSEKSLSSSSAFSLPSSPEKVVEHGLDHSPSLSNVSDRYRQSPMPTLLSSPERESYNTSDRSATVENAVDQTRVSPAPAPPPPLQPQRKHWEIPILSTIFQNAESPAPPPPPQRKHWEIPLFSTAIGQPRVSPPPPPPPPPPPPPPPPHQRTRKQWEIPSPSTPTDQSVSRPAALVQPSRPFVLPNPTTDVSPVELPPNSQQKNLGTNEDTPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPHPKPKDTTPRSVLPTPKQEDRVLDPKKSQNIAILLRALNVTVEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLKEHKEDSPIKLGPAEKFLKAVLGVPFAFKRVEAMLYIANFESEVEYLRKSFETLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDARAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSSTSQTPNSSSSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLNGDVSKLSKGISYITEVVRLNEATRQDESGKKFTESMNKFMRMAEVEILRIQAHESVALSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLSVLDRVCKEVGLINERTMVSSAHRFPVPVNPMLPQPLNPMLPQPLPGLFGKRQYSSSDDDSPSP 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 388 422 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 777 793 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 457 472 - -
Pral4391g00008 1250 Gene3D Formin, FH2 domain 789 1198 IPR042201 -
Pral4391g00008 1250 ProSiteProfiles Formin homology-2 (FH2) domain profile. 790 1215 IPR015425 -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 613 655 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 488 542 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 580 801 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 841 864 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 201 567 - -
Pral4391g00008 1250 Pfam Formin Homology 2 Domain 792 1189 IPR015425 -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 713 736 - -
Pral4391g00008 1250 SMART it6_source 790 1204 IPR015425 -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 306 360 - -
Pral4391g00008 1250 SUPERFAMILY Formin homology 2 domain (FH2 domain) 721 1201 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 361 375 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 739 758 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 45 65 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 580 600 - -
Pral4391g00008 1250 PANTHER FORMIN-RELATED 715 1235 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 161 181 - -
Pral4391g00008 1250 MobiDBLite consensus disorder prediction 45 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4391g00008 Pral-Chr4391 105355 111252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4391g00008 30 350 FH2 protein (formin) Gene Family AT3G25500 44.643 1.32e-28 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4391g00008 - - pcin:129287777 1809.27