Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4377g00022 ATGATGGCAAACAACTTAACGGGGCAGCTCTTGGGCTCAGAGATACATGGATTCCATACAATGCAGGAGTTGGATGTTGGAATCATTATGGAGGAAGCAAGACGCAGATGGCTTCGACCCAATGAGATTCATGCCATACTCTGCAATTACAAACATTTTACCATCCATGTCAAGCCAGTGACTTTGCCGAGAAGTGGTACTATTGTATTATTTGACAGGAAGAAGCTTAGGAACTTTCGTAAAGATGGCCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCACGAGCACTTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTACGCACATGGTGAAGAAAACCCACACTTTGTCCGCAGATGTTATTGGTTGCTTGATAAGAGTCTGGAGCATATTGTCCTTGTTCATTATCGTGAAATACACGAGGTTTTGCTTTTTCCCTCTTCTGTTTTCCTTCTAAATTCTCTTTTCACTGTACAAGATCTGATTAAGTTGTAG 516 0.4031 MMANNLTGQLLGSEIHGFHTMQELDVGIIMEEARRRWLRPNEIHAILCNYKHFTIHVKPVTLPRSGTIVLFDRKKLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGEENPHFVRRCYWLLDKSLEHIVLVHYREIHEVLLFPSSVFLLNSLFTVQDLIKL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4377g00022 171 ProSiteProfiles CG-1 DNA-binding domain profile. 26 152 IPR005559 GO:0003677
Pral4377g00022 171 SMART CG_1_2 29 147 IPR005559 GO:0003677
Pral4377g00022 171 Pfam CG-1 domain 32 145 IPR005559 GO:0003677
Pral4377g00022 171 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 25 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4377g00022 Pral-Chr4377 144583 146955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4377g00022 2 155 CAMTA Transcription Factor Family AT4G16150 77.922 1.89e-75 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4377g00022 K21596 - gmx:100793970 278.485