Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4376g00007 ATGGGTCCATCGGACATTAGGGACCTTTTAACAGCGTTTAGTCCCTCGTTAGACTTGTTTGCTATGAGCGCTGGAGATGGTCGCATAAAGATATGGGATACAGTTAATGGTCAAATCCAGACGGAGTTTGCTGACATCACATCAAGTGATGCAGCAAGTATATATGCAGGATCAGTGAAAGGCCATCTTTCAATAGATTATACATGCATGAAGTGGTTGTCATTAGAAGAAAAGAGAAAAAGGAAGCACACATCCTCATTGTTAGTACTTGGAACAGGTAGTGGTGACGTGTTGGCACTTGATGTGTCTGCTGGTCAATTAAATTGGAGAATTGGTGACTGCCATCCTGGAGGCGTGAAAGCTGTTTCATCTTCTACAAATGGATCATGTGTCTATACTGCAGGTGCAGATGGAATGATTTGCAAGATTGATTGTAAGACAGGAAACCTGTTGGAAAAATTCAAAGCTTCTACAAAGGCAATATCCTGTATGTCTGTTTCTTCAGATGGGAAGACAATAGCTACTGCAGCAGCACAACTAAAAATTTTTAATTGTTCTGATCACAAGAAGATACAGAAGTTCTTTGGCCATCCTGGATCTGTTCGGTGTCTTGCCTTCACTGAAGATGGGCAGTATATTCTATCCTCTGCTGTTGGGGAAAGATATGTTGCTGTCTGGAGGATTGATGGGGCAAAAAAGAAGTCAGTTAGTTGTGTTCTTGCAATGGATCATCCTGCTGTTTTTCTTGATAGCAGGTGCACTCCTAGCAGGGAGCTTGACAATGTTGGAGTATCTGTTTTGGCTATCTCAGAAGTTGGTGATTGTTATGTTTGGTTTGGAAATAATATTGAGGAACTACGCAATGTGAAGCCCATTAAAATATCATTATCTTTGGAAGAGATATCTTCCAGAAATTACATGGGTGCATTGCCAGCAATATATGCTGCAAAGTTAGAAGGCATCCACAATCCTACCTCTGGGCAGATTTTACTTGTTCATGGGTTGCTTGTAAAACCATCGTTTCAAAAAATTTCAGTGCACTCTGGCTCAGACATAAAATTGAATTTCTCTGATGATGGTGTTCTTCTTCGGTTGAACAAGTCCCTCGCAAAGCCTAAGAAGGCAAAAGATGTAAAAAAAGTTACTGCGCTAGACCGTGCTAATGCAGAGGATGCTCTGCTCCCAATTCCTAAGCTTTTTGATTCTCATGTGCAAGAGCAAGAATTTCAAGACTCTTCAGGCAAGGAAGTTATGGATGGTTTGGTTAGAAGTAGTGAATCTGTATCTATGGAGATTGAAGATGAGATGGCCCAGGACGAGACTGATGTGATCTGCATGGAGGAACAGATGAGATCTCTTAGGATGCTTGATGATGAAAATGATCTTGAATCAAATATCAAATTTAATTCTTCATTGTTGAAGCGTGTTGATCTTGATGCTAATCTTCCAATGAGAAAGATAAGAGCAACCGTCTTGACCATGGAGCCATCTGAAGCATGTAAGCTCCTGGAAGTTTTGCTGGCTGTTTGGCGATCAAGGTCATCTACTGGCAAGTACGCTCTTCCGTGGATATATAGCATATTAGTGATTCATGGTCACTACTTAATCTCTCAGGAAAATGTGACAAATATGCTTGATGCCTTGACCAAGATGGCTCGCTCTAGAGGATCTGCAGTTGAGACTTTGTTACAATTATCAGGTCGTCTGCAATTGGTGACAACACAGATTAACAAAGCTTCTCAAGATACAACTCGTTCAGTGCGAGATCCTCAAATGGAAGAAAGCGAAGATGAGGACAACGAGGATTCTTTTGAAGAGGAAGGGGATGATGCATCTGAAATAAGTAGTGATGATGATGAGAACTAG 1866 0.411 MGPSDIRDLLTAFSPSLDLFAMSAGDGRIKIWDTVNGQIQTEFADITSSDAASIYAGSVKGHLSIDYTCMKWLSLEEKRKRKHTSSLLVLGTGSGDVLALDVSAGQLNWRIGDCHPGGVKAVSSSTNGSCVYTAGADGMICKIDCKTGNLLEKFKASTKAISCMSVSSDGKTIATAAAQLKIFNCSDHKKIQKFFGHPGSVRCLAFTEDGQYILSSAVGERYVAVWRIDGAKKKSVSCVLAMDHPAVFLDSRCTPSRELDNVGVSVLAISEVGDCYVWFGNNIEELRNVKPIKISLSLEEISSRNYMGALPAIYAAKLEGIHNPTSGQILLVHGLLVKPSFQKISVHSGSDIKLNFSDDGVLLRLNKSLAKPKKAKDVKKVTALDRANAEDALLPIPKLFDSHVQEQEFQDSSGKEVMDGLVRSSESVSMEIEDEMAQDETDVICMEEQMRSLRMLDDENDLESNIKFNSSLLKRVDLDANLPMRKIRATVLTMEPSEACKLLEVLLAVWRSRSSTGKYALPWIYSILVIHGHYLISQENVTNMLDALTKMARSRGSAVETLLQLSGRLQLVTTQINKASQDTTRSVRDPQMEESEDEDNEDSFEEEGDDASEISSDDDEN 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4376g00007 621 Gene3D - 3 140 IPR015943 GO:0005515
Pral4376g00007 621 Gene3D - 141 253 IPR015943 GO:0005515
Pral4376g00007 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 194 236 IPR001680 GO:0005515
Pral4376g00007 621 MobiDBLite consensus disorder prediction 593 621 - -
Pral4376g00007 621 Pfam Dip2/Utp12 Family 482 573 IPR007148 -
Pral4376g00007 621 Pfam WD domain, G-beta repeat 191 226 IPR001680 GO:0005515
Pral4376g00007 621 Pfam WD domain, G-beta repeat 6 33 IPR001680 GO:0005515
Pral4376g00007 621 MobiDBLite consensus disorder prediction 579 621 - -
Pral4376g00007 621 ProSiteProfiles Trp-Asp (WD) repeats profile. 12 42 IPR001680 GO:0005515
Pral4376g00007 621 SMART WD40_4 147 184 IPR001680 GO:0005515
Pral4376g00007 621 SMART WD40_4 2 33 IPR001680 GO:0005515
Pral4376g00007 621 SMART WD40_4 104 144 IPR001680 GO:0005515
Pral4376g00007 621 SMART WD40_4 187 227 IPR001680 GO:0005515
Pral4376g00007 621 PANTHER OS03G0300300 PROTEIN 4 619 - -
Pral4376g00007 621 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 12 237 IPR011047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4376g00007 Pral-Chr4376 26929 33932 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4376g00007 115 250 U-box Gene Family AT2G33340 26.429 4.22e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4376g00007 K14546 - gmx:100784148 790.801