Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00057 ATGAATTCGAATTATGGTAAACCCAATCAAACGAGCGCTTCCTCTGCCTCAGTCAAAAACTTGAATTTCGACTTCGATCTCGGGATCGGATCCAATCGACCCAAATCTCTGAACGATCAGAAAAACCAGAAATCGACCCATACATTTTCTACTTCTTCTTCTTCGTCTTCATATTCATCCGCGCAGCCCAGACCCTCGTGGCAACCCAACAAGCCATCATGGACTCACCAGCCTGTACCAAATCTGGCAAATCAGTCTGGATTGCCTGGTGGCCCCACTTCCATGGTGGGGGATATCTCTGGTAAGAGTTGGGGATCTACACAACCGTCGGGTTCTAGTTCGACCATCGGAATTGTTGATAAAAACCCTAATCTCTTTGGAGATTTGGTGAGCTCTGCAATCGGACAGAGTTCTAAGAGTAGCAATAATACTCCCATAAAATCGATTCCTGCCTCTAAGGCATCAGGTACTACAACGAACAAAAGCTCCTTTTCGATGGGAAATATGGCGGATGCTTTGCCTAAAACCAGTAACACGACGGCAAGTAGTGGAAGTTGGGGATCTTCCGGGTACAATAATACTAGCATGGGCACTAATAAGAGCCCAAATCTTGGTGGTCCTTCAATGCGAAATATGAATAGTGGTAGTTCAGCTGGAAGTGGAATGAATGTTAATAGAGATCCATTCAGCTCTTTGGCTGGATTTGGATCAAAACCATCTGGTAGTCTTAATTCAGCTGGAATGGCCACAAAAAATAATAAAGCCGAGGATGATGGTTTTGGAGACTTCCAGAATGCCTCCAAACCAGGCCCTACCGCATTCCCATCAAGTAGTTCTGCTGCAGAGAATTTCAGTTTTCCAGGATCTACCAATTTGAATCAGAGCCCTGTGCAGACATCTGCTGGTGGTGACCCTATAGACATCTTATTCTCATCTTCCTCAGCTACGGCTGGAAGTGCTACTGCGACTTCGGAAGCATTTGCAGGAAATTCATCTTCTGAAATTGATGACTGGGGTTTGGATTCTGAATTTGGTGGAGGAGGACATGATGTGGGTGGTACAACCACTGAGCTTGAAGGGCTTCCACCTCCCCCTGCTGGGCTATCGGGTTCTACAGCAAAAGGTAAAGGGATGGACAATTACAAGCAAGGTCAGTTTGCAGACGCTATTAAGTGGTTATCTTGGGCCATCATCCTTCTTGAGAAAACGGAGGATAATGCTGGTATGGCAGAGGTGTTGTCATGCAGAGCCTCATGTTACAAAGAAGTTGGAGAGTATAAAAAAGCAGTGGCCGATTGTACAAAGGTACTAGAAAATGATGACACAAATGTATCTATATTGGTGCAACGTGCTCTCTTGTATGAGAGCATGGAAAAGTACAAGCTTGGTGCGGAAGACCTGAGGAGTGTTCTGAAGATTGATCCTGGTAATAGGGTTGCAAGAAGTACCATTCATCGGCTTACAAAGCTGGCTGACTAG 1479 0.4537 MNSNYGKPNQTSASSASVKNLNFDFDLGIGSNRPKSLNDQKNQKSTHTFSTSSSSSSYSSAQPRPSWQPNKPSWTHQPVPNLANQSGLPGGPTSMVGDISGKSWGSTQPSGSSSTIGIVDKNPNLFGDLVSSAIGQSSKSSNNTPIKSIPASKASGTTTNKSSFSMGNMADALPKTSNTTASSGSWGSSGYNNTSMGTNKSPNLGGPSMRNMNSGSSAGSGMNVNRDPFSSLAGFGSKPSGSLNSAGMATKNNKAEDDGFGDFQNASKPGPTAFPSSSSAAENFSFPGSTNLNQSPVQTSAGGDPIDILFSSSSATAGSATATSEAFAGNSSSEIDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGLSGSTAKGKGMDNYKQGQFADAIKWLSWAIILLEKTEDNAGMAEVLSCRASCYKEVGEYKKAVADCTKVLENDDTNVSILVQRALLYESMEKYKLGAEDLRSVLKIDPGNRVARSTIHRLTKLAD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00057 492 PANTHER OS03G0340700 PROTEIN 1 492 - -
Pral4375g00057 492 SMART tpr_5 410 443 IPR019734 GO:0005515
Pral4375g00057 492 SMART tpr_5 444 477 IPR019734 GO:0005515
Pral4375g00057 492 SMART tpr_5 370 403 IPR019734 GO:0005515
Pral4375g00057 492 MobiDBLite consensus disorder prediction 33 91 - -
Pral4375g00057 492 Gene3D Tetratricopeptide repeat domain 370 491 IPR011990 GO:0005515
Pral4375g00057 492 MobiDBLite consensus disorder prediction 135 227 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 99 119 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 24 119 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 235 251 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 135 305 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 338 364 - -
Pral4375g00057 492 MobiDBLite consensus disorder prediction 269 305 - -
Pral4375g00057 492 SUPERFAMILY TPR-like 374 484 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00057 Pral-Chr4375 377569 380080 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00057 369 487 Calmodulin-binding Proteins AT3G25230 31.250 1.29e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00057 - - pcin:129293443 780.4