Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00049 ATGGTGAGGCTGGATAGAGCAGGAAAAAACAAGAGCTTAGAGAGTTTATTGGATTTGAACAAGGTTGAGACGACGACGAAGAATCAACTGAGACCCCAGAAGTCTATTCCTGGGCATGGCCTGGAGTTCAATAATCTGTCGTATAGTGTGGTGAAGAAGGTGAAGAAAGATGGAACTTGGGTGAAGAAAGAGGCTTATCTTCTTCATGATATATCTGGGCAAGCCATGAGAGGTGAAGTTATGGCCATCATGGGGCCTAGTGGTGCAGGTAAGTCCACGTTTCTTGATGCTTTAGCTGGTCGAATTGCACAAGGAAGCTTGGAAGGATCCGTCAGAATTGATGGAAAACCGGTGACAACAAGTTACATGAAGATGGTGTCGTCTTATGTAATGCAAGATGATCAGCTGTTTCCTATGTTGACTGTTTTTGAGACATTTATGTTCGCAGCTGAAGTCAGGCTTCCCCCTTCTATTTCCAGAGAGGAAAAGAAGAAGAGGGTTTATGAGCTCCTTGACCAGCTTGGCTTGCAGAGTACAACACATACATATATTGGTGATGAGGGGAAGAGGGGAGTGTCAGGAGGAGAACGACGGAGGGTATCCATTGGCATAGACATAATCCATAAGCCATCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCCACTAGTGCTTTTAGTGTCGTCGAAAAGGTTAAGGACATTGCTCGAGCTGGCAGCATCGTCCTCATGACCATTCATCAGCCTTCCTACAGAATTCAAATGCTCCTTGATCGACTCACCATCCTCGCAAGGGGAAGATTGGTATATATGGGAAAGCCAAGTGCACTTGCAGCTCATCTTTCTGGGTTTGGAAGACCAGTACCTGATGGAGAGAACAGCTTAGAGTATCTTTTAGATGTGATCAAAGAATTTGATGAATCTAACGTGGGACTCGACCCACTTGTTCTGTACAATCGTGAAGGCCTGAAACCTGATCAAACAGCCAAGATGCCAGTTGTCAAAACACCAAGAAAAATTTATAAAAAGAGCAATAATGCACCAGCATCAAAGCACATGATTAGCCTGAAAAGCCAGGGCTTCAAAGCTGGAACAACACAGCCTGCAGATTCTGCACAGTTTAGTTATAACATCCATGGTGATCTTGATGAAGACGACGATGATGATGAGGATTTTGATAACTCTCTTGAAAGGAGAAGTGTTCATGCCCCTACGGCTAATACCATGATTAGTGGTGTCTATCCTCGTTTGGCTTCTCAGTTTTATAAGGATTTCTCTGCTAAAGATTTTTCTGTCTGGCTTTACCATGGTGTGGTAGGAACCCCTCGTCGTCCATCTTGGACTCCGGCGAGAACACCGGGTTGGACGACACCTGCGAGAACTCCGATGTCCGGACCAAGAAGCACTGTTTTAAACCAGTACTCGACATCATACGAGGAGCCTTTTCATCATCATGCCAAAGCACCATCTATGGTTAGTCAGTCCATGGCCTTGGACTCGTACGTAAGTTCCTACGAGGAATTTGACATTGAAGTGCTTGATGAGCCAAACGTTGGACCAAAGTACGCTAATCCATGGCTTCGTGAGGTTGCAGTGCTTTCATGGCGAACTGCTCTGAACGTGATTCGAACTCCAGAACTGTTCCTTTCTCGTGAGATTGTTCTAACTGTAATGGCTCTCGTCCTCTCCACCATCTTCAAAAACCTAAGCCACCCCACTTTCAAAGACATTAACAGGATTCTCAACTTCTACATTTTCTCAGTTTGCCTCGTCTTCTTCTCCTCCAACGACGCCGTCCCGTCGTTCATCCTCGAGAGATTCATCTTCATAAGAGAAACCTCCCACAATGCTTATCGAGCTTCTTCATATGTGATCTCTTCACTTATTGTCTATCTCCCATTTTTCGCAGTCCAAGGCCTCACTTTCGCTCTCATAACCAAATTCATGCTTCACCTGAAAAGCAGTCTTCTTTATTTTTGGTTGGTTCTTTATGCTTCTCTGATCACAACCAATGCCTACGTTATGCTTGTTAGTGCCCTTGTTCCCAGTTATATTACAGGTTATGCAGTGGTGATAGCTACGACGGCTTTGTTCTTCCTCACCTGTGGCTTCTTCCTCAAGAGAACTCAGATTCCCATGTACTGGAAATGGCTTCATTATATTTCTGCGATAAAGTATCCATTTGAAGCATTGTTGACTAATGAGTTTAAGAATGAACGTTGCTACACTGGGAGCTTATCGGATTTATCTCCTGGGCCGTTGGGAGATTTGAAGACGAGTGAAGGACATGATAGGTCAAACTGCCCGATCGGAAGCTTGATCGGAGAAGATGTTTTGGCCACCATGGATATTCAGATAGAGAAGATTTGGTTTGATATAGGCATCCTTCTCGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTCTTGAGATTTTATTCTAAGAATGAGAGGAAGTAA 2469 0.4427 MVRLDRAGKNKSLESLLDLNKVETTTKNQLRPQKSIPGHGLEFNNLSYSVVKKVKKDGTWVKKEAYLLHDISGQAMRGEVMAIMGPSGAGKSTFLDALAGRIAQGSLEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISREEKKKRVYELLDQLGLQSTTHTYIGDEGKRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAFSVVEKVKDIARAGSIVLMTIHQPSYRIQMLLDRLTILARGRLVYMGKPSALAAHLSGFGRPVPDGENSLEYLLDVIKEFDESNVGLDPLVLYNREGLKPDQTAKMPVVKTPRKIYKKSNNAPASKHMISLKSQGFKAGTTQPADSAQFSYNIHGDLDEDDDDDEDFDNSLERRSVHAPTANTMISGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRPSWTPARTPGWTTPARTPMSGPRSTVLNQYSTSYEEPFHHHAKAPSMVSQSMALDSYVSSYEEFDIEVLDEPNVGPKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSTIFKNLSHPTFKDINRILNFYIFSVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFALITKFMLHLKSSLLYFWLVLYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPMYWKWLHYISAIKYPFEALLTNEFKNERCYTGSLSDLSPGPLGDLKTSEGHDRSNCPIGSLIGEDVLATMDIQIEKIWFDIGILLAWGVLYRFFFYLVLRFYSKNERK 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00049 822 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 292 IPR003439 GO:0005524
Pral4375g00049 822 MobiDBLite consensus disorder prediction 452 469 - -
Pral4375g00049 822 CDD ABCG_EPDR 41 274 - -
Pral4375g00049 822 MobiDBLite consensus disorder prediction 448 469 - -
Pral4375g00049 822 Gene3D - 40 286 IPR027417 -
Pral4375g00049 822 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 809 - -
Pral4375g00049 822 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 283 IPR027417 -
Pral4375g00049 822 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Pral4375g00049 822 FunFam ABC transporter G family member 6 56 283 - -
Pral4375g00049 822 MobiDBLite consensus disorder prediction 379 402 - -
Pral4375g00049 822 SMART AAA_5 77 277 IPR003593 GO:0016887
Pral4375g00049 822 Pfam ABC-2 type transporter 532 738 IPR013525 GO:0016020|GO:0140359
Pral4375g00049 822 Pfam ABC transporter 68 220 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00049 Pral-Chr4375 323322 326802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00049 78 274 Calmodulin-binding Proteins AT2G36910 25.980 5.98e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00049 K05681 - gmx:100819497 1253.04