Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00045 ATGGTCTTCAAGGGAAGGTTTTTCTCCTCCAAGAAATCCGACTCTTCAAGCCCTGATGGGTCCTCCAATAATAGCCCCCGATCACTTGGCTCCAATTCACCTAGCAGATCCGAGAAGAAGAAGGTGAAATCAACTGCCAAAGAAGCCCAGATCGCTAGTACCAGCAGCGGCGCTGTCAGCGGTGGCAGAGGGCGTGGTGTCGCCGCCGTGCGTCGCAAATTGCAAGTAAAGGACGGGATCAAGAAGGATGCCATGGACAAGGAGAGTCAAACTCGGGTGGAGTCTCGTCTGACTTCGATGAGGCCAAGCTCCGGGGCGGAATTGGATTCCAGTTCGGAGTCTAAGTCAAAGAAGGCGACGGCGGTTGACGGAAAAGAATCTCCATCGGCTTCGGTTTCTCCAATTTTAGCATCCTCCCTTGGGTTGAACAGGATAAAGACGAGATCAGGACCGTTGCCACAGGAGAGTTTTTTGGGGTTTAGAAATGATAAGGGGCCCACGCTTGGTGCAAGTAACCTTTCTAGACCTGGTGGTAGTAGCTCAGGGTCAGCAAATGAAGGAAAGAAGGAGTTGGTGAATCAGAGCAGAGTGAAGAGTTCAGGCAGCGGAACTTGGATTGATAATGGCGTTAATTCAGATAATACTTCGACTTGGAGTGCTCCGTTCTGGGACCAAAGCCCTAAGGTATCGGCGCGGTCGCGGCTACAGAACGGGGAATCATCTTCCGCAGCAGGTAGACGGGATTCATCACCATCTCAGTCTGGAGCCATAAGTAGTGCCGATGTTTGCACTCCAGAGACTTCATATGATTTTGAAAACCCCAAAGAATCCGAATCTCCTCGTTTCCAAGCTATATTACGGGTCACAAGTGCTCCCAGAAAGAGGTTTCCTGGTGACATTAAGAGCTTTTCCCATGAGTTGAATTCCAAAGGTGTCCGACCCTATCCATTTTGGAAGCCTCGAGGGTTAAATAACTTGGAGGGAGTCTTGGTTGCTATTCGGGCAAAATTTGATAAAGAAAAGGAAGAAGTGAACTCTGAACTTGCTATTTTTGCGGCATACCTCGTTGGAGTTCTTGAAAAAAATGCAGATTCTCATCCTGAGTGGCAAGAGACAATAGAGGACTTACTGGTTTTGGCTAGGAGGTGTGCTATGACTACACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGATTTGGACGATCGACGTCAAGAACTTCCTCCTGGGATGCTTAAGCAGCTTCACACCCGTATGCTTTTCATTCTCACGAGGTGTACTAGATTATTGCAATTTCACAAAGAAAGTGGTTTGGCTGAGGATGAACATGTTTTTAATCTTCGACAATCTCGGGTCTTGCATTCTGCTGAAAAACGTATTCCTCCTGGCTTGGGAAGGGATGCAAAAAGTTCCAGTACCGCAAAAGTCTCAAATCCCTTAGCCAAAAAATTTTATAGTCAGGAGCAGCGTATATTAGATTGGAAAAAAGATGTAAAGCCTGAGAGGCTTTCACTTCCTGTTGATGATGATAGCTCAAAACACTTAGAGTCTCCTTCAGGTAGGGATCGGATGGCTTCTTGGAAGAAATTCCCATCTCCACCAGCAAAAAGTTCAAAGGAAGCAGCTCAGATGAAGGGCCAAACCAATGGGAGAGTTGAATCTTCAAAAATTTCAAATAGGAGATCAAATTCTGATGTAGATCTATCTGCTGCCAAGCTGTCAGAGCATATTCCTGTCAATGACTCCCAGGAACATACTCTTAAGAACCAACAAAAAGTTTCTTGGGGCTACTGGGGAGATCAGCAGAATATTAGTGAGGAGAGTTCTATAATCTGTCGTATATGTGAGGAGCAAGTCCCTACTGTCAATGTGGAAGATCATTCAAGGATTTGTGCTATTGCTGATAGATGCGATCAGAAGGGTCTAAGTGTCAATGAGCGTCTTATCCGAGTTGCTGATACACTAGAGAAGATGATAGAATTATGCACACAGAAGGATATCCAACAAGCAGTTGGAAGTCCTGATGTTGCAAAAGTATCAAATTCAAGCATAACTGAAGAATCTGATATCTCGCCAAAACTCAGTGATTGGTCTCGCAGAGGATCAGAGGATATGCTGGATTGTTTCCCGGAAGCTGATAATTCGGCTTTTATGGATGACCTAAAGGCCTTACCTCTTATATCATGTAAAACTCGTTTTGGTCCGAAGTCTGACCAAGGAATGACAGCATCATCTGCTGGGAGCATGACTCCTAGGTCACCTTTACTGACACCAAAGATGAGTCATATTGACTTGCTCTTGGCAGGGAGGGGTGCTTATTCTGAACAAGATGATATTCCACAGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAATACACCTCTGGATGATGATCGCTCAATCTCATATTTATTATCTTATCTTGATGATTTGAGGGTTGTTGTAGAGAGGAGAAAATTTGATGCACTCACAGTGGAGACCTTTGGAACTTGTATTGAGAAGCTGATACGGGAGAAGTATTTGCAGCTTACTGAGATGGTTGAAGATGAGAAGATTGACATAGCTAGCACTGTAATTGAAGAAGATGTGCCTTTGGAAGATGATATGGTTCGTAGCCTGAGAACAAGTCCAATCCACCCTTCAAAGGACCGTACCACTATTGATGACTTTGAGATTATGAAACCTATCAGTCGTGGGGCATTTGGACGGGTTTTCTTGGCTAAAAAGAGAACAACAGGGGATCTTTTTGCTATAAAGGTTCTCAGGAAGGCAGACATGATCCGTAAGAATGCTGTGGAAAGTATATTAGCTGAACGTGACATCTTAATCACAGTGCGCAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGTGAGAATCTGTACCTTGTCATGGAGTATCTTAATGGAGGGGATCTGTATTCATTATTGAGGAATTTAGGTTGCCTAGATGAGGAAGTTGCTCGTGTATATATTGCAGAAGTGGTGCTTGCACTAGAATATTTGCATTCACTGCGTATAGTTCATCGTGACTTGAAGCCTGACAATTTGTTGATTGCGCATGATGGTCACATTAAGCTAACAGACTTTGGGCTTTCAAAAGTTGGTCTCATCAATAGCACCGATGATTTGTCTGGCCCAGCAGTGAGTGGGACATCCCTCCTTGGGGAGGATGAACCTCAGTTATCGACATCAGAACATCAAAGGGAAAGGAGGAAAAAACGTTCAGCTGTGGGTACACCTGATTATTTAGCACCAGAGATACTTTTGGGAACTGGACATGGATATACTGCGGATTGGTGGTCTGTTGGTATCATTTTATTTGAACTGCTTGTTGGAATTCCGCCTTTCAATGCAGAGCATCCTCAGACCATATTTGATAACATTCTTAATCGCAAGATCCCTTGGCCCCATGTTCCCGAAGAAATGAGTTCTGAAGCACAAGACCTTATTGATCGATTGTTAACTGAAGATCCTAGTCAGAGACTTGGAGCTGGAGGGGCATCAGAGGTAAAGCAACATGTTTTCTTCAAGGATATAAACTGGGACACACTTGCCAGGCAGAAGGCTGCATTTGTCCCTGCCTCTGAGAGTGCTCTAGATACCAGTTATTTCACAAGTCGCTATTCATGGAGTACTCCTGATGGCCTTGTGTATCCAGCAAGTGATATTGAGGATTCTAGTGATGCAGACAGTTTAAGTGGCAGCAGTAGTTGTGTGAGCAATCGTCAAGATGAACTGGGGGATGAATGTGGGGGTTTCGCCGAGTTTGAGTCAGGCTTATCTGTCAATTACTCTTTCAGCAATTTCTCCTTTAAGAATCTCTCCCAGCTTGCGTCTATCAACTACGATCTTCTCACCAAGGGATATAAAGATGACCCACCTACAAATTCTAGCGCATAA 3921 0.4448 MVFKGRFFSSKKSDSSSPDGSSNNSPRSLGSNSPSRSEKKKVKSTAKEAQIASTSSGAVSGGRGRGVAAVRRKLQVKDGIKKDAMDKESQTRVESRLTSMRPSSGAELDSSSESKSKKATAVDGKESPSASVSPILASSLGLNRIKTRSGPLPQESFLGFRNDKGPTLGASNLSRPGGSSSGSANEGKKELVNQSRVKSSGSGTWIDNGVNSDNTSTWSAPFWDQSPKVSARSRLQNGESSSAAGRRDSSPSQSGAISSADVCTPETSYDFENPKESESPRFQAILRVTSAPRKRFPGDIKSFSHELNSKGVRPYPFWKPRGLNNLEGVLVAIRAKFDKEKEEVNSELAIFAAYLVGVLEKNADSHPEWQETIEDLLVLARRCAMTTPGEFWLQCEGIVQDLDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKRIPPGLGRDAKSSSTAKVSNPLAKKFYSQEQRILDWKKDVKPERLSLPVDDDSSKHLESPSGRDRMASWKKFPSPPAKSSKEAAQMKGQTNGRVESSKISNRRSNSDVDLSAAKLSEHIPVNDSQEHTLKNQQKVSWGYWGDQQNISEESSIICRICEEQVPTVNVEDHSRICAIADRCDQKGLSVNERLIRVADTLEKMIELCTQKDIQQAVGSPDVAKVSNSSITEESDISPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKALPLISCKTRFGPKSDQGMTASSAGSMTPRSPLLTPKMSHIDLLLAGRGAYSEQDDIPQMNELADIARCVANTPLDDDRSISYLLSYLDDLRVVVERRKFDALTVETFGTCIEKLIREKYLQLTEMVEDEKIDIASTVIEEDVPLEDDMVRSLRTSPIHPSKDRTTIDDFEIMKPISRGAFGRVFLAKKRTTGDLFAIKVLRKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSTSEHQRERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGIILFELLVGIPPFNAEHPQTIFDNILNRKIPWPHVPEEMSSEAQDLIDRLLTEDPSQRLGAGGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWSTPDGLVYPASDIEDSSDADSLSGSSSCVSNRQDELGDECGGFAEFESGLSVNYSFSNFSFKNLSQLASINYDLLTKGYKDDPPTNSSA 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 1228 1247 - -
Pral4375g00045 1306 Gene3D Phosphorylase Kinase; domain 1 892 1212 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 505 568 - -
Pral4375g00045 1306 ProSiteProfiles Protein kinase domain profile. 894 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00045 1306 ProSiteProfiles AGC-kinase C-terminal domain profile. 1184 1288 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral4375g00045 1306 Coils Coil 323 343 - -
Pral4375g00045 1306 CDD STKc_MAST_like 900 1188 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 1233 1247 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 71 94 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 9 33 - -
Pral4375g00045 1306 SMART serkin_6 894 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00045 1306 FunFam probable serine/threonine protein kinase IREH1 892 981 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 1055 1083 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 1 280 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 131 145 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 1068 1083 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 95 110 - -
Pral4375g00045 1306 Pfam Protein kinase domain 895 1183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00045 1306 SUPERFAMILY Protein kinase-like (PK-like) 891 1222 IPR011009 -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 167 266 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 505 525 - -
Pral4375g00045 1306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1013 1025 IPR008271 GO:0004672|GO:0006468
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 458 482 - -
Pral4375g00045 1306 Gene3D Transferase(Phosphotransferase) domain 1 978 1201 - -
Pral4375g00045 1306 MobiDBLite consensus disorder prediction 543 568 - -
Pral4375g00045 1306 PANTHER SERINE/THREONINE-PROTEIN KINASE 578 1277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00045 Pral-Chr4375 311265 321835 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00045 1 1300 AGC Kinase Gene Family AT3G17850 66.164 0.0 1632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Pral4375g00045 Pkinase 6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00045 - - qsa:O6P43_008469 1945.63