Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4375g00043 ATGATAATGCTGCTTCATAAACTCTCCATTTTGCTCAGTCTCTTCCTGGTTGTTCTTCCTCTGGTCAGACCAGATCTAGCTTCTGAGAAACTCGCTCTCGTGTCTCTCCGTTCGGCCGTTAGGGGCCGAACCCTTTTCTGGAACGTTTCTGAGCAGAGTCCATGCAAGTGGTTTGGAGTCCAGTGCGTAAATGACCGTGTCGTCCAGCTTCGTCTTCCCGGTGTTGCGCTTTCCGGCTCAATTCCCGCTGGCATTTTCGGCAACTTGACTCATCTTCGAACTCTGAGCTTGCGTTTCAATGCTTTGAGAGGTGGGCTTCCTGAAGATCTCGCTTCTTGCGTTAATCTTCGTAACCTTTACTTGCAACAGAACCTGCTCTCTGGTGAAATTCCAGAGTTCCTGTTTGCTTTACCGCACTTGGTGCGGCTTAATTTGGCGTCAAACAGTTTTTCCGGTTCAATTCCGTTGGGTTTCAACAATTTGACGAGGCTGAGAATTTTGTTCCTTGAAAACAACAACCTCTCAGGTGCCATCCCCCAGTTAAAGCTCGAAAACCTTGAACAATTCAATGTTTCAAACAATAAGCTGAATGGTTCGGTGCCAGAAAAGTTGCGAACTTTCGCAAAAGATTCGTTTCTGGGAAACTCTCTATGTGGGAAACCCCTCAGTCTTTGTCCAGGAGATGTTAATGGAACCGGAACCGGAACCGGAACCGGAGCCGGAACTGGAACTGGAAAATCTCCGACGCCTGCGATTGAAAACAATGAAGGAAACATGAAGAAGAAGAAACTATCAGGTGGCGCCATTGCCGGAATCGTCGTAGGGTCAGCGGTGTGTCTTCTGTTGATTCTTTTCGCTCTGATCATATTGTGCCGAAAGAGCAGCAATCAGAAGACAAGGTCGCTGGACATTTTCTCTGAGAAGCATCCTGAAGTGGCAATTCGAGGCGACATACCGGTTTCAGAAGTGGAACACAGTGGACACAGTAATGGCTACTCGGCTGTGGGGGCAACTGCGGCGGCGGCGACAGCGGCAGAAGCGAAAAAGCTTGTATTTTTTGGTCATTCACCAAAGGTGTTCGATCTTGAGGATTTGCTTAGGGCTTCTGCAGAAGTTTTGGGTAAAGGGACATTTGGAACAGCCTATAAGGCGACTCTGGAGGATGGGCCTGTGGTGGCGGTGAAGCGATTGAGGGATGTGACGATTTCTGATACAGAGTTCAAGGAGAAGATTGAAGCAGTAGGAGCAATGGATCATGAGAATTTGGTCCCTCTCATGGCTTACTACTATAGCAGAGAAGAAAAGCTTCTTGTCCATGATTACATGCCCACTGGAAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCTGGTAGGACCCCACTGAATTGGGAAGTGAGATCAGGCATTGCTCTTGGAGCAGCTAGAGGCATTGAGTACCTACACTCACAAGGGACTAATGTTTCTCATGGAAACATAAAGTCATCCAACGTCCTCCTCACCAGATCCTTGCATGCTAAAGTATCCGACTTCGGCCTGGCGCACCTTGCCAGTCCCACCTCCACTCCAAATCGAGTTACCGGCTACCGTGCACCCGAGGTAACTGATCCTCGCAAGGTATCTCAGAAGGCAGATGTCTATAGCTTTGGAGTATTGGTCTTGGAATTGCTTACTGGGAAGGCTCCGGCCCATGCGCTCTTGAACGATGAAGGAGTAGACCTCCCTAGATGGGTTCAATCTATTGTTAGAGAAGAGTGGACCTCTGAGGTGTTTGATCTTGAGCTTCTTAGGTATCAGAATGTTGAGGAAGAGATGGTTCAATTGTTGCAACTTGCAGTAGATTGTGTTGCTCCATACCCTGATCATCGGCCATCGATGACAGAAGTGACCAAGCGCATTGAAGAATTACGAGAGGCTAGCTCGAGACATGATCAAGACCGAATCCAAAATCTTGACCCGATCAAGGATATAGATGATATATCTTCTCACTGA 1992 0.4794 MIMLLHKLSILLSLFLVVLPLVRPDLASEKLALVSLRSAVRGRTLFWNVSEQSPCKWFGVQCVNDRVVQLRLPGVALSGSIPAGIFGNLTHLRTLSLRFNALRGGLPEDLASCVNLRNLYLQQNLLSGEIPEFLFALPHLVRLNLASNSFSGSIPLGFNNLTRLRILFLENNNLSGAIPQLKLENLEQFNVSNNKLNGSVPEKLRTFAKDSFLGNSLCGKPLSLCPGDVNGTGTGTGTGAGTGTGKSPTPAIENNEGNMKKKKLSGGAIAGIVVGSAVCLLLILFALIILCRKSSNQKTRSLDIFSEKHPEVAIRGDIPVSEVEHSGHSNGYSAVGATAAAATAAEAKKLVFFGHSPKVFDLEDLLRASAEVLGKGTFGTAYKATLEDGPVVAVKRLRDVTISDTEFKEKIEAVGAMDHENLVPLMAYYYSREEKLLVHDYMPTGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSQGTNVSHGNIKSSNVLLTRSLHAKVSDFGLAHLASPTSTPNRVTGYRAPEVTDPRKVSQKADVYSFGVLVLELLTGKAPAHALLNDEGVDLPRWVQSIVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCVAPYPDHRPSMTEVTKRIEELREASSRHDQDRIQNLDPIKDIDDISSH 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4375g00043 663 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Pral4375g00043 663 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Pral4375g00043 663 SUPERFAMILY Protein kinase-like (PK-like) 371 635 IPR011009 -
Pral4375g00043 663 SUPERFAMILY L domain-like 36 207 - -
Pral4375g00043 663 Gene3D Transferase(Phosphotransferase) domain 1 442 660 - -
Pral4375g00043 663 FunFam pollen receptor-like kinase 1 336 441 - -
Pral4375g00043 663 PANTHER OS05G0588300 PROTEIN 10 641 - -
Pral4375g00043 663 Gene3D Phosphorylase Kinase; domain 1 333 441 - -
Pral4375g00043 663 Pfam Protein kinase domain 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00043 663 ProSiteProfiles Protein kinase domain profile. 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4375g00043 663 Gene3D Ribonuclease Inhibitor 30 137 IPR032675 -
Pral4375g00043 663 FunFam Probable inactive receptor kinase At1g48480 442 645 - -
Pral4375g00043 663 MobiDBLite consensus disorder prediction 638 663 - -
Pral4375g00043 663 Gene3D Ribonuclease Inhibitor 139 225 IPR032675 -
Pral4375g00043 663 Pfam Leucine rich repeat 80 126 IPR001611 GO:0005515
Pral4375g00043 663 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4375g00043 Pral-Chr4375 283445 286840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4375g00043 25 640 Receptor kinase-like Gene Family AT1G48480 61.882 0.0 770
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4375g00043 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4375g00043 - - pcin:129292246 1077.39